Gene
RNA
| Item | Value |
|---|---|
| gene id | G52890 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 16243537 ~ 16244943 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0098655 | cation transmembrane transport | biological_process |
| GO:0098660 | inorganic ion transmembrane transport | biological_process |
| GO:0098662 | inorganic cation transmembrane transport | biological_process |
| GO:0030001 | metal ion transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| GO:0006812 | cation transport | biological_process |
| GO:0006813 | potassium ion transport | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU66212 | True | 1383 | lncRNA | 0.47 | 2 | 16243537 | 16244943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008972 | NA | coding | upstream | 109477 | 16126141 ~ 16134060 (+) |
| AMCG00008969 | ppfia3,LOC101073574,LOC105926717,LOC101158391,LOC104920703,LOC103358375 | coding | upstream | 189012 | 16052549 ~ 16054525 (+) |
| AMCG00008970 | NA | coding | upstream | 250987 | 15992113 ~ 15992550 (+) |
| AMCG00008966 | NA | coding | upstream | 292512 | 15943157 ~ 15951025 (+) |
| AMCG00008967 | NA | coding | upstream | 311558 | 15931316 ~ 15931979 (+) |
| AMCG00008978 | LOC108432681,LOC102199411,LOC102296518 | coding | downstream | 185874 | 16430817 ~ 16451251 (+) |
| AMCG00008981 | NA | coding | downstream | 302674 | 16547617 ~ 16558958 (+) |
| AMCG00008979 | NA | coding | downstream | 316079 | 16561022 ~ 16564235 (+) |
| AMCG00008982 | NA | coding | downstream | 354717 | 16599660 ~ 16602244 (+) |
| AMCG00008984 | NA | coding | downstream | 415049 | 16659992 ~ 16671430 (+) |
| G52877 | NA | non-coding | upstream | 33493 | 16208948 ~ 16210044 (+) |
| G52863 | NA | non-coding | upstream | 145091 | 16098240 ~ 16098446 (+) |
| G52861 | NA | non-coding | upstream | 157694 | 16085528 ~ 16085843 (+) |
| G52856 | NA | non-coding | upstream | 179823 | 16061840 ~ 16063714 (+) |
| G52817 | NA | non-coding | upstream | 288165 | 15953048 ~ 15955372 (+) |
| G52896 | NA | non-coding | downstream | 66449 | 16311392 ~ 16319852 (+) |
| G52931 | NA | non-coding | downstream | 98073 | 16343016 ~ 16344076 (+) |
| G52933 | NA | non-coding | downstream | 99313 | 16344256 ~ 16344678 (+) |
| G52945 | NA | non-coding | downstream | 124229 | 16369172 ~ 16369414 (+) |
| G52946 | NA | non-coding | downstream | 151337 | 16396280 ~ 16396481 (+) |
| AMCG00008965 | NA | other | upstream | 333386 | 15895430 ~ 15910151 (+) |
| AMCG00008960 | rps11,rs11 | other | upstream | 379867 | 15856224 ~ 15863670 (+) |
| AMCG00008931 | pp12c,LOC106564933 | other | upstream | 1222691 | 14982573 ~ 15020846 (+) |
| AMCG00008919 | zbtb45,LOC104952775,LOC105021497,LOC101077905,LOC102207372,LOC101487628,LOC102796714,LOC100704009 | other | upstream | 1431780 | 14807297 ~ 14811757 (+) |
| AMCG00008920 | NA | other | upstream | 1448353 | 14783043 ~ 14795184 (+) |
| G52942 | NA | other | downstream | 117159 | 16362102 ~ 16362511 (+) |
| AMCG00008983 | NA | other | downstream | 334920 | 16579863 ~ 16587381 (+) |
| G53028 | NA | other | downstream | 427560 | 16672503 ~ 16673542 (+) |
| AMCG00008985 | NA | other | downstream | 434882 | 16679825 ~ 16726295 (+) |
| AMCG00008988 | shank1,LOC108427331,LOC103392692 | other | downstream | 486446 | 16731389 ~ 16737499 (+) |
