Gene
RNA
| Item | Value |
|---|---|
| gene id | G53028 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 16672503 ~ 16673542 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU66371 | True | 1040 | TUCP | 0.58 | 1 | 16672503 | 16673542 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008984 | NA | coding | upstream | 1073 | 16659992 ~ 16671430 (+) |
| AMCG00008982 | NA | coding | upstream | 70259 | 16599660 ~ 16602244 (+) |
| AMCG00008979 | NA | coding | upstream | 108268 | 16561022 ~ 16564235 (+) |
| AMCG00008981 | NA | coding | upstream | 113545 | 16547617 ~ 16558958 (+) |
| AMCG00008978 | LOC108432681,LOC102199411,LOC102296518 | coding | upstream | 221252 | 16430817 ~ 16451251 (+) |
| AMCG00008991 | NA | coding | downstream | 124532 | 16798074 ~ 16798529 (+) |
| AMCG00008990 | NA | coding | downstream | 126057 | 16799599 ~ 16842718 (+) |
| AMCG00008993 | NA | coding | downstream | 487543 | 17161085 ~ 17161541 (+) |
| AMCG00008996 | NA | coding | downstream | 749904 | 17423446 ~ 17453217 (+) |
| AMCG00008997 | NA | coding | downstream | 818939 | 17492481 ~ 17601018 (+) |
| G53025 | LOC100846954,LOC107575789 | non-coding | upstream | 17580 | 16654193 ~ 16654923 (+) |
| G52946 | NA | non-coding | upstream | 276022 | 16396280 ~ 16396481 (+) |
| G52945 | NA | non-coding | upstream | 303089 | 16369172 ~ 16369414 (+) |
| G52933 | NA | non-coding | upstream | 327825 | 16344256 ~ 16344678 (+) |
| G52931 | NA | non-coding | upstream | 328427 | 16343016 ~ 16344076 (+) |
| G53069 | NA | non-coding | downstream | 162070 | 16835612 ~ 16858245 (+) |
| G53115 | NA | non-coding | downstream | 284971 | 16958513 ~ 16959031 (+) |
| G53128 | NA | non-coding | downstream | 335980 | 17009522 ~ 17009721 (+) |
| G53131 | NA | non-coding | downstream | 346143 | 17019685 ~ 17019964 (+) |
| G53137 | NA | non-coding | downstream | 373472 | 17047014 ~ 17048098 (+) |
| AMCG00008983 | NA | other | upstream | 85122 | 16579863 ~ 16587381 (+) |
| G52942 | NA | other | upstream | 309992 | 16362102 ~ 16362511 (+) |
| AMCG00008965 | NA | other | upstream | 762352 | 15895430 ~ 15910151 (+) |
| AMCG00008960 | rps11,rs11 | other | upstream | 808833 | 15856224 ~ 15863670 (+) |
| AMCG00008931 | pp12c,LOC106564933 | other | upstream | 1651657 | 14982573 ~ 15020846 (+) |
| AMCG00008985 | NA | other | downstream | 6283 | 16679825 ~ 16726295 (+) |
| AMCG00008988 | shank1,LOC108427331,LOC103392692 | other | downstream | 57847 | 16731389 ~ 16737499 (+) |
| AMCG00008986 | shank1,LOC108427331 | other | downstream | 73145 | 16746687 ~ 16750798 (+) |
| AMCG00008995 | NA | other | downstream | 657350 | 17330892 ~ 17343676 (+) |
| G53298 | mybpc2 | other | downstream | 1055824 | 17729366 ~ 17730660 (+) |
