G53069


Basic Information

Item Value
gene id G53069
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 16835612 ~ 16858245 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU66419
tcttgaacatgacaatgagttcactgtactaaactggcccccacagtcaccataCTGTgggcatctttgggatgtggtggaacgggagcttcgtgccctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcaccttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaagggggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatatgatatatattttcattaaacaagcTTTGGAGGGCTTGTGATCtgaatttattgtaaaatgtcagCCCAGTAGATAGCAATAGAACCGCTTCACACCAAAAATCACAGCAAGCCCTTCCTTCTCCAGTTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66419 True 420 lncRNA 0.43 2 16835612 16858245

Neighbor

gene id symbol gene type direction distance location
AMCG00008991 NA coding upstream 37083 16798074 ~ 16798529 (+)
AMCG00008984 NA coding upstream 164182 16659992 ~ 16671430 (+)
AMCG00008982 NA coding upstream 233368 16599660 ~ 16602244 (+)
AMCG00008979 NA coding upstream 271377 16561022 ~ 16564235 (+)
AMCG00008981 NA coding upstream 276654 16547617 ~ 16558958 (+)
AMCG00008993 NA coding downstream 302840 17161085 ~ 17161541 (+)
AMCG00008996 NA coding downstream 565201 17423446 ~ 17453217 (+)
AMCG00008997 NA coding downstream 634236 17492481 ~ 17601018 (+)
AMCG00009003 NA coding downstream 930275 17788520 ~ 17796297 (+)
AMCG00009005 NA coding downstream 961355 17819600 ~ 17829383 (+)
G53025 LOC100846954,LOC107575789 non-coding upstream 180689 16654193 ~ 16654923 (+)
G52946 NA non-coding upstream 439131 16396280 ~ 16396481 (+)
G52945 NA non-coding upstream 466198 16369172 ~ 16369414 (+)
G52933 NA non-coding upstream 490934 16344256 ~ 16344678 (+)
G52931 NA non-coding upstream 491536 16343016 ~ 16344076 (+)
G53115 NA non-coding downstream 100268 16958513 ~ 16959031 (+)
G53128 NA non-coding downstream 151277 17009522 ~ 17009721 (+)
G53131 NA non-coding downstream 161440 17019685 ~ 17019964 (+)
G53137 NA non-coding downstream 188769 17047014 ~ 17048098 (+)
G53139 NA non-coding downstream 193228 17051473 ~ 17051675 (+)
AMCG00008986 shank1,LOC108427331 other upstream 84814 16746687 ~ 16750798 (+)
AMCG00008988 shank1,LOC108427331,LOC103392692 other upstream 98113 16731389 ~ 16737499 (+)
AMCG00008985 NA other upstream 109317 16679825 ~ 16726295 (+)
G53028 NA other upstream 162070 16672503 ~ 16673542 (+)
AMCG00008983 NA other upstream 248231 16579863 ~ 16587381 (+)
AMCG00008995 NA other downstream 472647 17330892 ~ 17343676 (+)
G53298 mybpc2 other downstream 871121 17729366 ~ 17730660 (+)
AMCG00009009 NA other downstream 1059303 17917548 ~ 17920592 (+)
G53520 NA other downstream 1692527 18550772 ~ 18553960 (+)
AMCG00009022 dnajc19,LOC107727073 other downstream 2669652 19527897 ~ 19547507 (+)

Expression


Co-expression Network