G53128


Basic Information

Item Value
gene id G53128
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 17009522 ~ 17009721 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU66499
CCAGAAGGGGTGAATTTATTCAGGTTCAGCCAGCAGATAATCcaaataacaatagtaatgtATCGATAGCAGCCCGAGAGTgtttaaataatagtatttatatCCTTATTAAAAGGTTGATTTATCTGTGTTTATCCGTggtctgtaaataaacaaagaaataacaatactTTTAAGCTTACTGTGCTGATCACAAGAAC

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU66499 True 200 lncRNA 0.33 1 17009522 17009721

Neighbor

gene id symbol gene type direction distance location
AMCG00008990 NA coding upstream 166804 16799599 ~ 16842718 (+)
AMCG00008991 NA coding upstream 210993 16798074 ~ 16798529 (+)
AMCG00008984 NA coding upstream 338092 16659992 ~ 16671430 (+)
AMCG00008982 NA coding upstream 407278 16599660 ~ 16602244 (+)
AMCG00008979 NA coding upstream 445287 16561022 ~ 16564235 (+)
AMCG00008993 NA coding downstream 151364 17161085 ~ 17161541 (+)
AMCG00008996 NA coding downstream 413725 17423446 ~ 17453217 (+)
AMCG00008997 NA coding downstream 482760 17492481 ~ 17601018 (+)
AMCG00009003 NA coding downstream 778799 17788520 ~ 17796297 (+)
AMCG00009005 NA coding downstream 809879 17819600 ~ 17829383 (+)
G53115 NA non-coding upstream 50491 16958513 ~ 16959031 (+)
G53069 NA non-coding upstream 151277 16835612 ~ 16858245 (+)
G53025 LOC100846954,LOC107575789 non-coding upstream 354599 16654193 ~ 16654923 (+)
G52946 NA non-coding upstream 613041 16396280 ~ 16396481 (+)
G52945 NA non-coding upstream 640108 16369172 ~ 16369414 (+)
G53131 NA non-coding downstream 9964 17019685 ~ 17019964 (+)
G53137 NA non-coding downstream 37293 17047014 ~ 17048098 (+)
G53139 NA non-coding downstream 41752 17051473 ~ 17051675 (+)
G53155 NA non-coding downstream 99358 17109079 ~ 17109684 (+)
G53157 NA non-coding downstream 102395 17112116 ~ 17113008 (+)
AMCG00008986 shank1,LOC108427331 other upstream 258724 16746687 ~ 16750798 (+)
AMCG00008988 shank1,LOC108427331,LOC103392692 other upstream 272023 16731389 ~ 16737499 (+)
AMCG00008985 NA other upstream 283227 16679825 ~ 16726295 (+)
G53028 NA other upstream 335980 16672503 ~ 16673542 (+)
AMCG00008983 NA other upstream 422141 16579863 ~ 16587381 (+)
AMCG00008995 NA other downstream 321171 17330892 ~ 17343676 (+)
G53298 mybpc2 other downstream 719645 17729366 ~ 17730660 (+)
AMCG00009009 NA other downstream 907827 17917548 ~ 17920592 (+)
G53520 NA other downstream 1541051 18550772 ~ 18553960 (+)
AMCG00009022 dnajc19,LOC107727073 other downstream 2518176 19527897 ~ 19547507 (+)

Expression


Co-expression Network