Gene
RNA
| Item | Value |
|---|---|
| gene id | G53157 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 17112116 ~ 17113008 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0015672 | monovalent inorganic cation transport | biological_process |
| GO:0030001 | metal ion transport | biological_process |
| GO:0006814 | sodium ion transport | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU66530 | True | 893 | lncRNA | 0.41 | 1 | 17112116 | 17113008 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008990 | NA | coding | upstream | 269398 | 16799599 ~ 16842718 (+) |
| AMCG00008991 | NA | coding | upstream | 313587 | 16798074 ~ 16798529 (+) |
| AMCG00008984 | NA | coding | upstream | 440686 | 16659992 ~ 16671430 (+) |
| AMCG00008982 | NA | coding | upstream | 509872 | 16599660 ~ 16602244 (+) |
| AMCG00008979 | NA | coding | upstream | 547881 | 16561022 ~ 16564235 (+) |
| AMCG00008993 | NA | coding | downstream | 48077 | 17161085 ~ 17161541 (+) |
| AMCG00008996 | NA | coding | downstream | 310438 | 17423446 ~ 17453217 (+) |
| AMCG00008997 | NA | coding | downstream | 379473 | 17492481 ~ 17601018 (+) |
| AMCG00009003 | NA | coding | downstream | 675512 | 17788520 ~ 17796297 (+) |
| AMCG00009005 | NA | coding | downstream | 706592 | 17819600 ~ 17829383 (+) |
| G53155 | NA | non-coding | upstream | 2432 | 17109079 ~ 17109684 (+) |
| G53139 | NA | non-coding | upstream | 60441 | 17051473 ~ 17051675 (+) |
| G53137 | NA | non-coding | upstream | 64018 | 17047014 ~ 17048098 (+) |
| G53131 | NA | non-coding | upstream | 92152 | 17019685 ~ 17019964 (+) |
| G53128 | NA | non-coding | upstream | 102395 | 17009522 ~ 17009721 (+) |
| G53176 | NA | non-coding | downstream | 198460 | 17311468 ~ 17311668 (+) |
| G53178 | NA | non-coding | downstream | 205283 | 17318291 ~ 17318510 (+) |
| G53180 | NA | non-coding | downstream | 207962 | 17320970 ~ 17321222 (+) |
| G53223 | NA | non-coding | downstream | 414211 | 17527219 ~ 17527433 (+) |
| G53224 | NA | non-coding | downstream | 414470 | 17527478 ~ 17613616 (+) |
| AMCG00008986 | shank1,LOC108427331 | other | upstream | 361318 | 16746687 ~ 16750798 (+) |
| AMCG00008988 | shank1,LOC108427331,LOC103392692 | other | upstream | 374617 | 16731389 ~ 16737499 (+) |
| AMCG00008985 | NA | other | upstream | 385821 | 16679825 ~ 16726295 (+) |
| G53028 | NA | other | upstream | 438574 | 16672503 ~ 16673542 (+) |
| AMCG00008983 | NA | other | upstream | 524735 | 16579863 ~ 16587381 (+) |
| AMCG00008995 | NA | other | downstream | 217884 | 17330892 ~ 17343676 (+) |
| G53298 | mybpc2 | other | downstream | 616358 | 17729366 ~ 17730660 (+) |
| AMCG00009009 | NA | other | downstream | 804540 | 17917548 ~ 17920592 (+) |
| G53520 | NA | other | downstream | 1437764 | 18550772 ~ 18553960 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | downstream | 2414889 | 19527897 ~ 19547507 (+) |
