G53366


Basic Information

Item Value
gene id G53366
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 17884481 ~ 17884687 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU66762
ACGGGTTATAACAGTATATTCTGTATTTCCAAAAAGCATTAAGGCAACTAGGAAATGTGGTAGAGTTACAGAAATTGACAGGCAAATACGAATGCtaacagtttacattttttattatttatatatattttaaaagccaaCAGTAAAAATGGCATCCAATATCCTGCAGTAGTGCTAGGGCAACATTTAGGGAACCTGTAATACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66762 True 207 lncRNA 0.33 1 17884481 17884687

Neighbor

gene id symbol gene type direction distance location
AMCG00009002 LOC103358380 coding upstream 15523 17863809 ~ 17868958 (+)
AMCG00009004 med25,LOC106601541,LOC106601511 coding upstream 38813 17831943 ~ 17845668 (+)
AMCG00009005 NA coding upstream 55098 17819600 ~ 17829383 (+)
AMCG00009003 NA coding upstream 88184 17788520 ~ 17796297 (+)
AMCG00008997 NA coding upstream 283463 17492481 ~ 17601018 (+)
AMCG00009007 NA coding downstream 14391 17899078 ~ 17915696 (+)
AMCG00009010 NA coding downstream 91347 17976034 ~ 18004741 (+)
AMCG00009008 NA coding downstream 129019 18013706 ~ 18022319 (+)
AMCG00009006 ect2,LOC107593151 coding downstream 152107 18036794 ~ 18040961 (+)
AMCG00009014 NA coding downstream 334385 18219072 ~ 18220253 (+)
G53358 NA non-coding upstream 9826 17872802 ~ 17874655 (+)
G53353 NA non-coding upstream 11814 17871429 ~ 17872667 (+)
G53354 NA non-coding upstream 13415 17870507 ~ 17871066 (+)
G53352 NA non-coding upstream 14014 17868996 ~ 17870467 (+)
G53300 NA non-coding upstream 137545 17740544 ~ 17746936 (+)
G53406 NA non-coding downstream 192984 18077671 ~ 18077878 (+)
G53409 NA non-coding downstream 199117 18083804 ~ 18084038 (+)
G53410 NA non-coding downstream 199631 18084318 ~ 18084530 (+)
G53414 NA non-coding downstream 211543 18096230 ~ 18098551 (+)
G53415 NA non-coding downstream 214329 18099016 ~ 18099647 (+)
G53298 mybpc2 other upstream 153821 17729366 ~ 17730660 (+)
AMCG00008995 NA other upstream 540805 17330892 ~ 17343676 (+)
AMCG00008986 shank1,LOC108427331 other upstream 1133683 16746687 ~ 16750798 (+)
AMCG00008988 shank1,LOC108427331,LOC103392692 other upstream 1146982 16731389 ~ 16737499 (+)
AMCG00008985 NA other upstream 1158186 16679825 ~ 16726295 (+)
AMCG00009009 NA other downstream 32861 17917548 ~ 17920592 (+)
G53520 NA other downstream 666085 18550772 ~ 18553960 (+)
AMCG00009022 dnajc19,LOC107727073 other downstream 1643210 19527897 ~ 19547507 (+)
AMCG00009033 nlgn1,LOC103399994,LOC102210587,LOC102311540 other downstream 2492108 20376795 ~ 20396356 (+)
G53911 NA other downstream 3283544 21168231 ~ 21168575 (+)

Expression


Co-expression Network