Gene
RNA
| Item | Value |
|---|---|
| gene id | G53520 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 18550772 ~ 18553960 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU66948 | True | 869 | TUCP | 0.45 | 2 | 18550772 | 18553960 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009016 | rfc4,LOC103355474 | coding | upstream | 176504 | 18361526 ~ 18374268 (+) |
| AMCG00009014 | NA | coding | upstream | 330519 | 18219072 ~ 18220253 (+) |
| AMCG00009006 | ect2,LOC107593151 | coding | upstream | 509811 | 18036794 ~ 18040961 (+) |
| AMCG00009008 | NA | coding | upstream | 528453 | 18013706 ~ 18022319 (+) |
| AMCG00009010 | NA | coding | upstream | 546031 | 17976034 ~ 18004741 (+) |
| AMCG00009026 | LOC107550661,LOC107566880 | coding | downstream | 1307318 | 19861278 ~ 19915906 (+) |
| AMCG00009025 | atp11b | coding | downstream | 1385116 | 19939076 ~ 19949435 (+) |
| AMCG00009032 | NA | coding | downstream | 1709115 | 20263075 ~ 20263866 (+) |
| AMCG00009034 | nlgn1 | coding | downstream | 1902497 | 20456457 ~ 20461014 (+) |
| AMCG00009035 | nlgn1,LOC106584306 | coding | downstream | 2132185 | 20686145 ~ 20692387 (+) |
| G53517 | NA | non-coding | upstream | 14398 | 18528343 ~ 18536374 (+) |
| G53495 | NA | non-coding | upstream | 78495 | 18420852 ~ 18472277 (+) |
| G53496 | NA | non-coding | upstream | 120819 | 18427665 ~ 18429953 (+) |
| G53493 | NA | non-coding | upstream | 140642 | 18408926 ~ 18410130 (+) |
| G53458 | eif4a2,LOC105889495,LOC107656867,LOC107568626,LOC108267852 | non-coding | upstream | 148553 | 18401505 ~ 18402219 (+) |
| G53519 | NA | non-coding | downstream | 999 | 18554959 ~ 18584509 (+) |
| G53524 | NA | non-coding | downstream | 39092 | 18593052 ~ 18593516 (+) |
| G53542 | NA | non-coding | downstream | 47769 | 18601729 ~ 18601952 (+) |
| G53567 | NA | non-coding | downstream | 168148 | 18722108 ~ 18722401 (+) |
| G53572 | NA | non-coding | downstream | 229188 | 18783148 ~ 18783749 (+) |
| AMCG00009009 | NA | other | upstream | 630180 | 17917548 ~ 17920592 (+) |
| G53298 | mybpc2 | other | upstream | 820112 | 17729366 ~ 17730660 (+) |
| AMCG00008995 | NA | other | upstream | 1207096 | 17330892 ~ 17343676 (+) |
| AMCG00008986 | shank1,LOC108427331 | other | upstream | 1799974 | 16746687 ~ 16750798 (+) |
| AMCG00008988 | shank1,LOC108427331,LOC103392692 | other | upstream | 1813273 | 16731389 ~ 16737499 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | downstream | 973937 | 19527897 ~ 19547507 (+) |
| AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | downstream | 1822835 | 20376795 ~ 20396356 (+) |
| G53911 | NA | other | downstream | 2614271 | 21168231 ~ 21168575 (+) |
| G53915 | NA | other | downstream | 2720651 | 21274611 ~ 21275354 (+) |
| G53917 | NA | other | downstream | 2738281 | 21292241 ~ 21293901 (+) |
