Item | Value |
---|---|
gene id | G53585 |
gene name | LOC100846954 |
gene type | non-coding |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030126.1 |
NCBI id | CM030126.1 |
chromosome length | 46242406 |
location | 18993885 ~ 19042745 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
description |
---|
transposase-like, partial |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU67019 | True | 402 | lncRNA | 0.46 | 2 | 18993885 | 19042745 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00009016 | rfc4,LOC103355474 | coding | upstream | 619617 | 18361526 ~ 18374268 (+) |
AMCG00009014 | NA | coding | upstream | 773632 | 18219072 ~ 18220253 (+) |
AMCG00009006 | ect2,LOC107593151 | coding | upstream | 952924 | 18036794 ~ 18040961 (+) |
AMCG00009008 | NA | coding | upstream | 971566 | 18013706 ~ 18022319 (+) |
AMCG00009010 | NA | coding | upstream | 989144 | 17976034 ~ 18004741 (+) |
AMCG00009026 | LOC107550661,LOC107566880 | coding | downstream | 818533 | 19861278 ~ 19915906 (+) |
AMCG00009025 | atp11b | coding | downstream | 896331 | 19939076 ~ 19949435 (+) |
AMCG00009032 | NA | coding | downstream | 1220330 | 20263075 ~ 20263866 (+) |
AMCG00009034 | nlgn1 | coding | downstream | 1413712 | 20456457 ~ 20461014 (+) |
AMCG00009035 | nlgn1,LOC106584306 | coding | downstream | 1643400 | 20686145 ~ 20692387 (+) |
G53581 | NA | non-coding | upstream | 65710 | 18927737 ~ 18928175 (+) |
G53572 | NA | non-coding | upstream | 210136 | 18783148 ~ 18783749 (+) |
G53567 | NA | non-coding | upstream | 271484 | 18722108 ~ 18722401 (+) |
G53542 | NA | non-coding | upstream | 391933 | 18601729 ~ 18601952 (+) |
G53524 | NA | non-coding | upstream | 400369 | 18593052 ~ 18593516 (+) |
G53627 | LOC107575789 | non-coding | downstream | 277036 | 19319781 ~ 19320284 (+) |
G53630 | NA | non-coding | downstream | 308508 | 19351253 ~ 19351461 (+) |
G53631 | NA | non-coding | downstream | 308790 | 19351535 ~ 19351799 (+) |
G53645 | NA | non-coding | downstream | 446338 | 19489083 ~ 19489284 (+) |
G53663 | NA | non-coding | downstream | 534575 | 19577320 ~ 19577907 (+) |
G53520 | NA | other | upstream | 439925 | 18550772 ~ 18553960 (+) |
AMCG00009009 | NA | other | upstream | 1073293 | 17917548 ~ 17920592 (+) |
G53298 | mybpc2 | other | upstream | 1263225 | 17729366 ~ 17730660 (+) |
AMCG00008995 | NA | other | upstream | 1650209 | 17330892 ~ 17343676 (+) |
AMCG00008986 | shank1,LOC108427331 | other | upstream | 2243087 | 16746687 ~ 16750798 (+) |
AMCG00009022 | dnajc19,LOC107727073 | other | downstream | 485152 | 19527897 ~ 19547507 (+) |
AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | downstream | 1334050 | 20376795 ~ 20396356 (+) |
G53911 | NA | other | downstream | 2125486 | 21168231 ~ 21168575 (+) |
G53915 | NA | other | downstream | 2231866 | 21274611 ~ 21275354 (+) |
G53917 | NA | other | downstream | 2249496 | 21292241 ~ 21293901 (+) |