Gene
RNA
| Item | Value |
|---|---|
| gene id | G53645 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 19489083 ~ 19489284 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67090 | True | 202 | lncRNA | 0.42 | 1 | 19489083 | 19489284 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009016 | rfc4,LOC103355474 | coding | upstream | 1114815 | 18361526 ~ 18374268 (+) |
| AMCG00009014 | NA | coding | upstream | 1268830 | 18219072 ~ 18220253 (+) |
| AMCG00009006 | ect2,LOC107593151 | coding | upstream | 1448122 | 18036794 ~ 18040961 (+) |
| AMCG00009008 | NA | coding | upstream | 1466764 | 18013706 ~ 18022319 (+) |
| AMCG00009010 | NA | coding | upstream | 1484342 | 17976034 ~ 18004741 (+) |
| AMCG00009026 | LOC107550661,LOC107566880 | coding | downstream | 371994 | 19861278 ~ 19915906 (+) |
| AMCG00009025 | atp11b | coding | downstream | 449792 | 19939076 ~ 19949435 (+) |
| AMCG00009032 | NA | coding | downstream | 773791 | 20263075 ~ 20263866 (+) |
| AMCG00009034 | nlgn1 | coding | downstream | 967173 | 20456457 ~ 20461014 (+) |
| AMCG00009035 | nlgn1,LOC106584306 | coding | downstream | 1196861 | 20686145 ~ 20692387 (+) |
| G53631 | NA | non-coding | upstream | 137284 | 19351535 ~ 19351799 (+) |
| G53630 | NA | non-coding | upstream | 137622 | 19351253 ~ 19351461 (+) |
| G53627 | LOC107575789 | non-coding | upstream | 168799 | 19319781 ~ 19320284 (+) |
| G53585 | LOC100846954 | non-coding | upstream | 446338 | 18993885 ~ 19042745 (+) |
| G53581 | NA | non-coding | upstream | 560908 | 18927737 ~ 18928175 (+) |
| G53663 | NA | non-coding | downstream | 88036 | 19577320 ~ 19577907 (+) |
| G53675 | NA | non-coding | downstream | 192690 | 19681974 ~ 19682227 (+) |
| G53695 | NA | non-coding | downstream | 331295 | 19820579 ~ 19820929 (+) |
| G53706 | NA | non-coding | downstream | 470289 | 19959573 ~ 19960355 (+) |
| G53711 | LOC107656862,LOC107568628,LOC107722250,LOC107708830,LOC107578399,LOC107681826 | non-coding | downstream | 494585 | 19983869 ~ 19985883 (+) |
| G53520 | NA | other | upstream | 935123 | 18550772 ~ 18553960 (+) |
| AMCG00009009 | NA | other | upstream | 1568491 | 17917548 ~ 17920592 (+) |
| G53298 | mybpc2 | other | upstream | 1758423 | 17729366 ~ 17730660 (+) |
| AMCG00008995 | NA | other | upstream | 2145407 | 17330892 ~ 17343676 (+) |
| AMCG00008986 | shank1,LOC108427331 | other | upstream | 2738285 | 16746687 ~ 16750798 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | downstream | 38613 | 19527897 ~ 19547507 (+) |
| AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | downstream | 887511 | 20376795 ~ 20396356 (+) |
| G53911 | NA | other | downstream | 1678947 | 21168231 ~ 21168575 (+) |
| G53915 | NA | other | downstream | 1785327 | 21274611 ~ 21275354 (+) |
| G53917 | NA | other | downstream | 1802957 | 21292241 ~ 21293901 (+) |
