Gene
RNA
| Item | Value |
|---|---|
| gene id | G53752 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 20005889 ~ 20006091 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67228 | True | 203 | lncRNA | 0.45 | 1 | 20005889 | 20006091 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009024 | NA | coding | downstream | 265890 | 19739288 ~ 19739999 (-) |
| AMCG00009023 | NA | coding | downstream | 277359 | 19722941 ~ 19728530 (-) |
| AMCG00009021 | sox2,LOC106584342,LOC107655276 | coding | downstream | 744778 | 19260287 ~ 19261111 (-) |
| AMCG00009020 | NA | coding | downstream | 1532188 | 18472634 ~ 18473701 (-) |
| AMCG00009017 | NA | coding | downstream | 1595767 | 18404514 ~ 18410122 (-) |
| AMCG00009030 | NA | coding | upstream | 102855 | 20108946 ~ 20110200 (-) |
| AMCG00009031 | NA | coding | upstream | 142006 | 20148097 ~ 20150492 (-) |
| AMCG00009037 | NA | coding | upstream | 735200 | 20741291 ~ 20741486 (-) |
| AMCG00009036 | NA | coding | upstream | 735402 | 20741493 ~ 20742332 (-) |
| AMCG00009040 | NA | coding | upstream | 1288233 | 21294324 ~ 21295469 (-) |
| G53751 | NA | non-coding | downstream | 12637 | 19993033 ~ 19993252 (-) |
| G53748 | NA | non-coding | downstream | 45535 | 19959573 ~ 19960354 (-) |
| G53746 | NA | non-coding | downstream | 47604 | 19956713 ~ 19958285 (-) |
| G53722 | NA | non-coding | downstream | 68447 | 19859819 ~ 19937442 (-) |
| G53668 | NA | non-coding | downstream | 383687 | 19621812 ~ 19622202 (-) |
| G53776 | NA | non-coding | upstream | 62820 | 20068911 ~ 20070175 (-) |
| G53790 | NA | non-coding | upstream | 93656 | 20099747 ~ 20100015 (-) |
| G53849 | LOC100846954 | non-coding | upstream | 579897 | 20585988 ~ 20586203 (-) |
| G53899 | NA | non-coding | upstream | 1056982 | 21063073 ~ 21063351 (-) |
| G53916 | NA | non-coding | upstream | 1268639 | 21274730 ~ 21275341 (-) |
| AMCG00009029 | NA | other | downstream | 35613 | 19961027 ~ 19970276 (-) |
| G53355 | lrrc4b,LOC107677294,LOC107556667 | other | downstream | 2137193 | 17868386 ~ 17868696 (-) |
| AMCG00009001 | NA | other | downstream | 2258846 | 17724719 ~ 17747043 (-) |
| AMCG00008989 | prr12b,prr12,LOC107708947,LOC104948901,LOC108441158,LOC108273897,LOC107729421,LOC107658420 | other | downstream | 3092590 | 16823795 ~ 16913299 (-) |
| G53017 | NA | other | downstream | 3391428 | 16613224 ~ 16614461 (-) |
| AMCG00009027 | NA | other | upstream | 55433 | 20061524 ~ 20062179 (-) |
| G53809 | NA | other | upstream | 173708 | 20179799 ~ 20271814 (-) |
| G54003 | LOC107575789 | other | upstream | 2176997 | 22183088 ~ 22183565 (-) |
| AMCG00009060 | hltf | other | upstream | 3819138 | 23825229 ~ 23863035 (-) |
| G54544 | NA | other | upstream | 5147175 | 25153266 ~ 25156338 (-) |
