Gene
RNA
| Item | Value |
|---|---|
| gene id | G53855 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 20631448 ~ 20724272 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67345 | True | 337 | lncRNA | 0.52 | 2 | 20631448 | 20724272 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009034 | nlgn1 | coding | upstream | 170434 | 20456457 ~ 20461014 (+) |
| AMCG00009032 | NA | coding | upstream | 367582 | 20263075 ~ 20263866 (+) |
| AMCG00009025 | atp11b | coding | upstream | 682013 | 19939076 ~ 19949435 (+) |
| AMCG00009026 | LOC107550661,LOC107566880 | coding | upstream | 715542 | 19861278 ~ 19915906 (+) |
| AMCG00009016 | rfc4,LOC103355474 | coding | upstream | 2257180 | 18361526 ~ 18374268 (+) |
| AMCG00009038 | NA | coding | downstream | 273626 | 20997898 ~ 21087025 (+) |
| AMCG00009042 | NA | coding | downstream | 1706068 | 22430340 ~ 22441467 (+) |
| AMCG00009043 | NA | coding | downstream | 1889080 | 22613352 ~ 22631352 (+) |
| AMCG00009049 | trpc1 | coding | downstream | 1908445 | 22632717 ~ 22648476 (+) |
| AMCG00009050 | u2surp | coding | downstream | 1945612 | 22669884 ~ 22686612 (+) |
| G53834 | NA | non-coding | upstream | 86495 | 20449729 ~ 20544953 (+) |
| G53812 | NA | non-coding | upstream | 314414 | 20290778 ~ 20317034 (+) |
| G53803 | NA | non-coding | upstream | 359634 | 20263496 ~ 20271814 (+) |
| G53793 | LOC107745311 | non-coding | upstream | 418646 | 20136632 ~ 20212802 (+) |
| G53791 | NA | non-coding | upstream | 527448 | 20103780 ~ 20104000 (+) |
| G53877 | NA | non-coding | downstream | 10083 | 20734355 ~ 20734623 (+) |
| G53878 | NA | non-coding | downstream | 35397 | 20759669 ~ 20759870 (+) |
| G53882 | NA | non-coding | downstream | 180781 | 20905053 ~ 20905348 (+) |
| G53884 | NA | non-coding | downstream | 185622 | 20909894 ~ 20910148 (+) |
| G53886 | NA | non-coding | downstream | 249705 | 20973977 ~ 20974187 (+) |
| AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | upstream | 235092 | 20376795 ~ 20396356 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | upstream | 1083941 | 19527897 ~ 19547507 (+) |
| G53520 | NA | other | upstream | 2077488 | 18550772 ~ 18553960 (+) |
| AMCG00009009 | NA | other | upstream | 2710856 | 17917548 ~ 17920592 (+) |
| G53298 | mybpc2 | other | upstream | 2900788 | 17729366 ~ 17730660 (+) |
| G53911 | NA | other | downstream | 443959 | 21168231 ~ 21168575 (+) |
| G53915 | NA | other | downstream | 550339 | 21274611 ~ 21275354 (+) |
| G53917 | NA | other | downstream | 567969 | 21292241 ~ 21293901 (+) |
| G54263 | NA | other | downstream | 3159045 | 23883317 ~ 23975906 (+) |
| AMCG00009085 | NA | other | downstream | 4088346 | 24812618 ~ 24816534 (+) |
