Gene
RNA
| Item | Value |
|---|---|
| gene id | G53912 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 21231350 ~ 21231697 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67403 | True | 348 | lncRNA | 0.45 | 1 | 21231350 | 21231697 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009038 | NA | coding | upstream | 144325 | 20997898 ~ 21087025 (+) |
| AMCG00009035 | nlgn1,LOC106584306 | coding | upstream | 538963 | 20686145 ~ 20692387 (+) |
| AMCG00009034 | nlgn1 | coding | upstream | 770336 | 20456457 ~ 20461014 (+) |
| AMCG00009032 | NA | coding | upstream | 967484 | 20263075 ~ 20263866 (+) |
| AMCG00009025 | atp11b | coding | upstream | 1281915 | 19939076 ~ 19949435 (+) |
| AMCG00009042 | NA | coding | downstream | 1198643 | 22430340 ~ 22441467 (+) |
| AMCG00009043 | NA | coding | downstream | 1381655 | 22613352 ~ 22631352 (+) |
| AMCG00009049 | trpc1 | coding | downstream | 1401020 | 22632717 ~ 22648476 (+) |
| AMCG00009050 | u2surp | coding | downstream | 1438187 | 22669884 ~ 22686612 (+) |
| AMCG00009052 | chst2 | coding | downstream | 1472489 | 22704186 ~ 22705397 (+) |
| G53900 | NA | non-coding | upstream | 165353 | 21065158 ~ 21065997 (+) |
| G53895 | NA | non-coding | upstream | 193589 | 21037490 ~ 21037761 (+) |
| G53886 | NA | non-coding | upstream | 257163 | 20973977 ~ 20974187 (+) |
| G53884 | NA | non-coding | upstream | 321202 | 20909894 ~ 20910148 (+) |
| G53882 | NA | non-coding | upstream | 326002 | 20905053 ~ 20905348 (+) |
| G53913 | NA | non-coding | downstream | 57 | 21231754 ~ 21232205 (+) |
| G53938 | NA | non-coding | downstream | 341677 | 21573374 ~ 21573766 (+) |
| G53946 | NA | non-coding | downstream | 449048 | 21680745 ~ 21681260 (+) |
| G53950 | NA | non-coding | downstream | 539579 | 21771276 ~ 21771532 (+) |
| G53956 | NA | non-coding | downstream | 618016 | 21849713 ~ 21850231 (+) |
| G53911 | NA | other | upstream | 62775 | 21168231 ~ 21168575 (+) |
| AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | upstream | 834994 | 20376795 ~ 20396356 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | upstream | 1683843 | 19527897 ~ 19547507 (+) |
| G53520 | NA | other | upstream | 2677390 | 18550772 ~ 18553960 (+) |
| AMCG00009009 | NA | other | upstream | 3310758 | 17917548 ~ 17920592 (+) |
| G53915 | NA | other | downstream | 42914 | 21274611 ~ 21275354 (+) |
| G53917 | NA | other | downstream | 60544 | 21292241 ~ 21293901 (+) |
| G54263 | NA | other | downstream | 2651620 | 23883317 ~ 23975906 (+) |
| AMCG00009085 | NA | other | downstream | 3580921 | 24812618 ~ 24816534 (+) |
| AMCG00009088 | LOC104966806,LOC108444346 | other | downstream | 3666419 | 24898116 ~ 24917863 (+) |
