Gene
RNA
| Item | Value |
|---|---|
| gene id | G53915 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 21274611 ~ 21275354 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67406 | True | 744 | TUCP | 0.43 | 1 | 21274611 | 21275354 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009038 | NA | coding | upstream | 187586 | 20997898 ~ 21087025 (+) |
| AMCG00009035 | nlgn1,LOC106584306 | coding | upstream | 582224 | 20686145 ~ 20692387 (+) |
| AMCG00009034 | nlgn1 | coding | upstream | 813597 | 20456457 ~ 20461014 (+) |
| AMCG00009032 | NA | coding | upstream | 1010745 | 20263075 ~ 20263866 (+) |
| AMCG00009025 | atp11b | coding | upstream | 1325176 | 19939076 ~ 19949435 (+) |
| AMCG00009042 | NA | coding | downstream | 1154986 | 22430340 ~ 22441467 (+) |
| AMCG00009043 | NA | coding | downstream | 1337998 | 22613352 ~ 22631352 (+) |
| AMCG00009049 | trpc1 | coding | downstream | 1357363 | 22632717 ~ 22648476 (+) |
| AMCG00009050 | u2surp | coding | downstream | 1394530 | 22669884 ~ 22686612 (+) |
| AMCG00009052 | chst2 | coding | downstream | 1428832 | 22704186 ~ 22705397 (+) |
| G53913 | NA | non-coding | upstream | 42406 | 21231754 ~ 21232205 (+) |
| G53912 | NA | non-coding | upstream | 42914 | 21231350 ~ 21231697 (+) |
| G53900 | NA | non-coding | upstream | 208614 | 21065158 ~ 21065997 (+) |
| G53895 | NA | non-coding | upstream | 236850 | 21037490 ~ 21037761 (+) |
| G53886 | NA | non-coding | upstream | 300424 | 20973977 ~ 20974187 (+) |
| G53938 | NA | non-coding | downstream | 298020 | 21573374 ~ 21573766 (+) |
| G53946 | NA | non-coding | downstream | 405391 | 21680745 ~ 21681260 (+) |
| G53950 | NA | non-coding | downstream | 495922 | 21771276 ~ 21771532 (+) |
| G53956 | NA | non-coding | downstream | 574359 | 21849713 ~ 21850231 (+) |
| G53987 | NA | non-coding | downstream | 753330 | 22028684 ~ 22029096 (+) |
| G53911 | NA | other | upstream | 106036 | 21168231 ~ 21168575 (+) |
| AMCG00009033 | nlgn1,LOC103399994,LOC102210587,LOC102311540 | other | upstream | 878255 | 20376795 ~ 20396356 (+) |
| AMCG00009022 | dnajc19,LOC107727073 | other | upstream | 1727104 | 19527897 ~ 19547507 (+) |
| G53520 | NA | other | upstream | 2720651 | 18550772 ~ 18553960 (+) |
| AMCG00009009 | NA | other | upstream | 3354019 | 17917548 ~ 17920592 (+) |
| G53917 | NA | other | downstream | 16887 | 21292241 ~ 21293901 (+) |
| G54263 | NA | other | downstream | 2607963 | 23883317 ~ 23975906 (+) |
| AMCG00009085 | NA | other | downstream | 3537264 | 24812618 ~ 24816534 (+) |
| AMCG00009088 | LOC104966806,LOC108444346 | other | downstream | 3622762 | 24898116 ~ 24917863 (+) |
| AMCG00009104 | NA | other | downstream | 4214357 | 25489711 ~ 25493573 (+) |
