Gene
RNA
| Item | Value |
|---|---|
| gene id | G54124 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 22793012 ~ 22826612 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU67662 | True | 346 | lncRNA | 0.50 | 2 | 22793012 | 22826612 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009048 | pcolce2,pcolce2b,LOC107588030 | coding | downstream | 126827 | 22648694 ~ 22666185 (-) |
| AMCG00009045 | atr,LOC107677746,LOC107700496 | coding | downstream | 186125 | 22559529 ~ 22606887 (-) |
| AMCG00009046 | xrn1,LOC107563287,LOC107710613 | coding | downstream | 236024 | 22540747 ~ 22556988 (-) |
| AMCG00009047 | NA | coding | downstream | 263748 | 22511192 ~ 22529264 (-) |
| AMCG00009044 | LOC107578566 | coding | downstream | 306211 | 22475354 ~ 22486801 (-) |
| AMCG00009054 | plod2 | coding | upstream | 551995 | 23378607 ~ 23402492 (-) |
| AMCG00009055 | si:ch73-206p6.1,LOC107557560,LOC107679633,LOC107739143,LOC108272643 | coding | upstream | 623933 | 23450545 ~ 23469100 (-) |
| AMCG00009057 | zic4,LOC107588037,LOC101481722,LOC102208739,LOC100703503,LOC107757405,LOC107557562 | coding | upstream | 818842 | 23645454 ~ 23656150 (-) |
| AMCG00009062 | nck1b,nck1,LOC107734380,LOC107683484,LOC107713805,LOC107588047 | coding | upstream | 1067482 | 23894094 ~ 23914458 (-) |
| AMCG00009063 | slc35g2,slc35g2b,LOC108263162,LOC107588046,LOC107687509,LOC103026733 | coding | upstream | 1133987 | 23960599 ~ 23961852 (-) |
| G54078 | NA | non-coding | downstream | 162504 | 22629331 ~ 22630508 (-) |
| G54008 | NA | non-coding | downstream | 489119 | 22303608 ~ 22303893 (-) |
| G53999 | NA | non-coding | downstream | 645448 | 22147308 ~ 22147564 (-) |
| G53955 | NA | non-coding | downstream | 984401 | 21808284 ~ 21808611 (-) |
| G53953 | NA | non-coding | downstream | 1021021 | 21771646 ~ 21771991 (-) |
| G54139 | NA | non-coding | upstream | 149849 | 22976461 ~ 22976682 (-) |
| G54161 | NA | non-coding | upstream | 312843 | 23139455 ~ 23139692 (-) |
| G54167 | LOC103376870 | non-coding | upstream | 342827 | 23169439 ~ 23169829 (-) |
| G54168 | NA | non-coding | upstream | 353715 | 23180327 ~ 23191495 (-) |
| G54179 | NA | non-coding | upstream | 475842 | 23302454 ~ 23302685 (-) |
| G54003 | LOC107575789 | other | downstream | 609447 | 22183088 ~ 22183565 (-) |
| G53809 | NA | other | downstream | 2521198 | 20179799 ~ 20271814 (-) |
| AMCG00009027 | NA | other | downstream | 2730833 | 20061524 ~ 20062179 (-) |
| AMCG00009029 | NA | other | downstream | 2822736 | 19961027 ~ 19970276 (-) |
| G53355 | lrrc4b,LOC107677294,LOC107556667 | other | downstream | 4924316 | 17868386 ~ 17868696 (-) |
| AMCG00009060 | hltf | other | upstream | 998617 | 23825229 ~ 23863035 (-) |
| G54544 | NA | other | upstream | 2326654 | 25153266 ~ 25156338 (-) |
| AMCG00009100 | NA | other | upstream | 2347065 | 25173677 ~ 25176378 (-) |
| AMCG00009106 | NA | other | upstream | 2633994 | 25460606 ~ 25462690 (-) |
| AMCG00009105 | NA | other | upstream | 2703217 | 25529829 ~ 25531566 (-) |
