G54547


Basic Information

Item Value
gene id G54547
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 25172001 ~ 25172864 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU68188
AGTCGGCGTGTACTGCTTTCTCGTTGGCTGCCAGGTCCATTAAAAGTCCAGTGCTTCCCCCTGCCTGTCAGGATCCACATAGGGTCCAGCTCCTTCCGGGAACATTTCATCCACAGCCGGCTTCATGATAATCTGCTTTTGTTAAGTTCACTTATTTAATACCAGCACAAATAAACACTCCAGCTAGAGCTGTTGATCGTCTGAATCTACTTCCTGTCTTACATAGAAATGCTTCCGTG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU68188 True 239 lncRNA 0.47 2 25172001 25172864

Neighbor

gene id symbol gene type direction distance location
AMCG00009096 NA coding upstream 14450 25151798 ~ 25157551 (+)
AMCG00009097 NA coding upstream 134323 25032102 ~ 25037678 (+)
AMCG00009089 NA coding upstream 213365 24950775 ~ 24958636 (+)
AMCG00009083 NA coding upstream 290059 24873573 ~ 24881942 (+)
AMCG00009087 NA coding upstream 312771 24858013 ~ 24859230 (+)
AMCG00009107 NA coding downstream 398464 25571328 ~ 25574564 (+)
AMCG00009111 LOC108428906,LOC107694655,LOC106600124,LOC107384117 coding downstream 450933 25623797 ~ 25639855 (+)
AMCG00009109 epha4b,LOC105890571,LOC108428906 coding downstream 494656 25667520 ~ 25674012 (+)
AMCG00009110 LOC103372263,LOC106600124,LOC108428906,LOC108239506,LOC102295545,LOC101472694,LOC103395911 coding downstream 520622 25693486 ~ 25716048 (+)
AMCG00009117 acvr1l,LOC107678695,LOC107602619,LOC108428902,LOC107749086 coding downstream 1324988 26497852 ~ 26509639 (+)
G54430 NA non-coding upstream 384916 24783510 ~ 24787085 (+)
G54356 NA non-coding upstream 893440 24277905 ~ 24278561 (+)
G54328 NA non-coding upstream 1005940 24165790 ~ 24166061 (+)
G54264 NA non-coding upstream 1277714 23890127 ~ 23894287 (+)
G54238 NA non-coding upstream 1507349 23664157 ~ 23664652 (+)
G54563 NA non-coding downstream 135396 25308260 ~ 25308495 (+)
G54566 NA non-coding downstream 174414 25347278 ~ 25348983 (+)
G54580 NA non-coding downstream 231806 25404670 ~ 25413822 (+)
G54608 NA non-coding downstream 343509 25516373 ~ 25517909 (+)
G54609 NA non-coding downstream 348155 25521019 ~ 25521314 (+)
AMCG00009088 LOC104966806,LOC108444346 other upstream 254138 24898116 ~ 24917863 (+)
AMCG00009085 NA other upstream 355467 24812618 ~ 24816534 (+)
G54263 NA other upstream 1196095 23883317 ~ 23975906 (+)
G53917 NA other upstream 3878100 21292241 ~ 21293901 (+)
G53915 NA other upstream 3896647 21274611 ~ 21275354 (+)
AMCG00009104 NA other downstream 316847 25489711 ~ 25493573 (+)
AMCG00009108 NA other downstream 412018 25584882 ~ 25587615 (+)
AMCG00009129 NA other downstream 1620673 26793537 ~ 26796768 (+)
AMCG00009164 NA other downstream 2440719 27613583 ~ 27626011 (+)
AMCG00009204 NA other downstream 3593590 28766454 ~ 28799600 (+)

Expression


Co-expression Network