Gene
RNA
| Item | Value |
|---|---|
| gene id | G55333 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 28755298 ~ 28755633 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0098772 | molecular function regulator | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU69150 | True | 336 | lncRNA | 0.35 | 1 | 28755298 | 28755633 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009196 | NA | coding | downstream | 106225 | 28643287 ~ 28649073 (-) |
| AMCG00009195 | NA | coding | downstream | 114687 | 28632355 ~ 28640611 (-) |
| AMCG00009194 | LOC106560660 | coding | downstream | 124347 | 28627412 ~ 28630951 (-) |
| AMCG00009193 | NA | coding | downstream | 139160 | 28610870 ~ 28616138 (-) |
| AMCG00009197 | stk25b,stk25,LOC107585675,LOC107722570,LOC107693719,LOC107589848 | coding | downstream | 155456 | 28582225 ~ 28599842 (-) |
| AMCG00009209 | NA | coding | upstream | 265005 | 29020638 ~ 29023928 (-) |
| AMCG00009212 | NA | coding | upstream | 273676 | 29029309 ~ 29052524 (-) |
| AMCG00009213 | NA | coding | upstream | 308130 | 29063763 ~ 29089403 (-) |
| AMCG00009211 | NA | coding | upstream | 334422 | 29090055 ~ 29103281 (-) |
| AMCG00009210 | NA | coding | upstream | 364782 | 29120415 ~ 29135151 (-) |
| G55326 | NA | non-coding | downstream | 27328 | 28721540 ~ 28727970 (-) |
| G55268 | NA | non-coding | downstream | 249502 | 28488651 ~ 28505796 (-) |
| G55153 | NA | non-coding | downstream | 884037 | 27871002 ~ 27871261 (-) |
| G55026 | NA | non-coding | downstream | 1227804 | 27526047 ~ 27527494 (-) |
| G55025 | NA | non-coding | downstream | 1229319 | 27525686 ~ 27525979 (-) |
| G55359 | NA | non-coding | upstream | 87840 | 28843473 ~ 28893883 (-) |
| G55404 | NA | non-coding | upstream | 300080 | 29055713 ~ 29057241 (-) |
| G55488 | NA | non-coding | upstream | 702982 | 29458615 ~ 29458827 (-) |
| G55551 | NA | non-coding | upstream | 1003894 | 29759527 ~ 29762165 (-) |
| G55610 | NA | non-coding | upstream | 1219996 | 29975629 ~ 29976269 (-) |
| AMCG00009186 | LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 | other | downstream | 365202 | 28385083 ~ 28390096 (-) |
| AMCG00009165 | rpl35a,LOC106612432 | other | downstream | 1137126 | 27613598 ~ 27618172 (-) |
| AMCG00009151 | NA | other | downstream | 1419567 | 27314317 ~ 27335731 (-) |
| AMCG00009148 | NA | other | downstream | 1601823 | 27110996 ~ 27153475 (-) |
| G54821 | NA | other | downstream | 1958644 | 26793541 ~ 26796654 (-) |
| AMCG00009215 | gpr17 | other | upstream | 302308 | 29057941 ~ 29063030 (-) |
| AMCG00009229 | ccd50,LOC106613514 | other | upstream | 905327 | 29660960 ~ 29704929 (-) |
| AMCG00009235 | NA | other | upstream | 1222304 | 29977937 ~ 29990810 (-) |
| AMCG00009241 | NA | other | upstream | 1494238 | 30249871 ~ 30256499 (-) |
| AMCG00009265 | NA | other | upstream | 1843841 | 30599474 ~ 30657612 (-) |
