Gene
RNA
| Item | Value |
|---|---|
| gene id | G55488 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 29458615 ~ 29458827 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU69343 | True | 213 | lncRNA | 0.39 | 1 | 29458615 | 29458827 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009217 | NA | coding | downstream | 261472 | 29187536 ~ 29197143 (-) |
| AMCG00009216 | NA | coding | downstream | 286824 | 29163273 ~ 29171791 (-) |
| AMCG00009210 | NA | coding | downstream | 323464 | 29120415 ~ 29135151 (-) |
| AMCG00009211 | NA | coding | downstream | 355334 | 29090055 ~ 29103281 (-) |
| AMCG00009213 | NA | coding | downstream | 369212 | 29063763 ~ 29089403 (-) |
| AMCG00009230 | NA | coding | upstream | 114242 | 29573069 ~ 29587854 (-) |
| AMCG00009228 | NA | coding | upstream | 178164 | 29636991 ~ 29641912 (-) |
| AMCG00009232 | NA | coding | upstream | 246506 | 29705333 ~ 29705803 (-) |
| AMCG00009234 | NA | coding | upstream | 449782 | 29908609 ~ 29927458 (-) |
| AMCG00009233 | atp13a3,LOC106613657 | coding | upstream | 471279 | 29930106 ~ 29955770 (-) |
| G55404 | NA | non-coding | downstream | 401374 | 29055713 ~ 29057241 (-) |
| G55359 | NA | non-coding | downstream | 564732 | 28843473 ~ 28893883 (-) |
| G55333 | NA | non-coding | downstream | 702982 | 28755298 ~ 28755633 (-) |
| G55326 | NA | non-coding | downstream | 730645 | 28721540 ~ 28727970 (-) |
| G55268 | NA | non-coding | downstream | 952819 | 28488651 ~ 28505796 (-) |
| G55551 | NA | non-coding | upstream | 300700 | 29759527 ~ 29762165 (-) |
| G55610 | NA | non-coding | upstream | 516802 | 29975629 ~ 29976269 (-) |
| G55648 | NA | non-coding | upstream | 777332 | 30236159 ~ 30236395 (-) |
| G55703 | NA | non-coding | upstream | 1021952 | 30480779 ~ 30483373 (-) |
| G55722 | NA | non-coding | upstream | 1032411 | 30491238 ~ 30491980 (-) |
| AMCG00009215 | gpr17 | other | downstream | 395585 | 29057941 ~ 29063030 (-) |
| AMCG00009186 | LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 | other | downstream | 1068519 | 28385083 ~ 28390096 (-) |
| AMCG00009165 | rpl35a,LOC106612432 | other | downstream | 1840443 | 27613598 ~ 27618172 (-) |
| AMCG00009151 | NA | other | downstream | 2122884 | 27314317 ~ 27335731 (-) |
| AMCG00009148 | NA | other | downstream | 2305140 | 27110996 ~ 27153475 (-) |
| AMCG00009229 | ccd50,LOC106613514 | other | upstream | 202133 | 29660960 ~ 29704929 (-) |
| AMCG00009235 | NA | other | upstream | 519110 | 29977937 ~ 29990810 (-) |
| AMCG00009241 | NA | other | upstream | 791044 | 30249871 ~ 30256499 (-) |
| AMCG00009265 | NA | other | upstream | 1140647 | 30599474 ~ 30657612 (-) |
| G55878 | NA | other | upstream | 1475737 | 30934564 ~ 30937251 (-) |
