G55591


Basic Information

Item Value
gene id G55591
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29995126 ~ 29995438 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU69474
ctctttctgtgtttttgctcACCAAGCCCACGGTGATCTGCCCCTCTTTGATGCAGGTCCCTGTGTGTGCCAATTTGAAGATCTCCAGCAGTTCATCTTTGGACAGCAGGCGGCTGGAGTTGTGGATGGCCTTTCTGCAGGAGGACGCGGCCGCCCCGTCCTGCTCGGAGTCGTCTGAGTCTTCAGAGCAGGTCTGCCAGGCTCCCTCCTCCACACAGTCTTCAAACCTATCCTCCCCCTCCTCGACCTCCACTTCATTACTAATCATTTCTTCCTCCATCCAGTCTCCCTCGCCATCACTGTGCTCCTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69474 True 313 TUCP 0.56 1 29995126 29995438

Neighbor

gene id symbol gene type direction distance location
AMCG00009231 her6,hes1,LOC107711114,LOC107680502,LOC107582845,LOC107722674,LOC107685314 coding upstream 134757 29858925 ~ 29860369 (+)
AMCG00009226 opa1,LOC107585173,LOC107722677,LOC107711112,LOC107582739 coding upstream 252521 29717027 ~ 29742605 (+)
AMCG00009227 NA coding upstream 341789 29648617 ~ 29653337 (+)
AMCG00009222 tp63 coding upstream 422073 29563108 ~ 29573053 (+)
AMCG00009223 NA coding upstream 465632 29528879 ~ 29529494 (+)
AMCG00009237 fam43a,LOC106573864,LOC102785697 coding downstream 13364 30008802 ~ 30009842 (+)
AMCG00009238 NA coding downstream 191462 30186900 ~ 30208729 (+)
AMCG00009239 NA coding downstream 223431 30218869 ~ 30223477 (+)
AMCG00009250 NA coding downstream 269815 30265253 ~ 30298128 (+)
AMCG00009246 dis3l2 coding downstream 317356 30312794 ~ 30327528 (+)
G55595 lsg1 non-coding upstream 485 29993622 ~ 29994641 (+)
G55586 NA non-coding upstream 18859 29975603 ~ 29976267 (+)
G55564 NA non-coding upstream 62974 29858295 ~ 29932152 (+)
G55512 NA non-coding upstream 353190 29641489 ~ 29641936 (+)
G55487 NA non-coding upstream 536383 29458421 ~ 29458743 (+)
G55596 NA non-coding downstream 125 29995563 ~ 29995870 (+)
G55597 NA non-coding downstream 2791 29998229 ~ 29998486 (+)
G55620 NA non-coding downstream 146774 30142212 ~ 30222127 (+)
G55649 NA non-coding downstream 241486 30236924 ~ 30242731 (+)
G55707 NA non-coding downstream 500105 30495543 ~ 30497604 (+)
G55573 NA other upstream 83562 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 820395 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 886899 29103608 ~ 29108227 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other upstream 983358 28928892 ~ 29011768 (+)
AMCG00009204 NA other upstream 1195526 28766454 ~ 28799600 (+)
G56060 NA other downstream 2166322 32161760 ~ 32165365 (+)
G56368 NA other downstream 4005358 34000796 ~ 34031445 (+)
G56369 NA other downstream 4020232 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 4367981 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 5393476 35388914 ~ 35389327 (+)

Expression


Co-expression Network