G55975


Basic Information

Item Value
gene id G55975
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 31915168 ~ 31915373 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU69967
GGGGGCTGTTGTAATCAACTCAGCACACCAGGTATTAAAGATACAGGCTGCCCTGAGgatgttagattttttttttttttagcctcatgttgaaataaaaccaCTGAGTTTCAATCAGTTAGTCCCATGCTGGTTGAGATTCAGCATCTAACCAGATGAATCTGTTTTTATTCTCATTTCACTGCTGGGAATTACCTGAGGGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69967 True 206 lncRNA 0.40 1 31915168 31915373

Neighbor

gene id symbol gene type direction distance location
AMCG00009286 pax3 coding downstream 5974 31906726 ~ 31909194 (-)
AMCG00009285 pax3 coding downstream 14744 31882629 ~ 31900424 (-)
AMCG00009282 epha4,LOC108440631 coding downstream 105705 31786769 ~ 31809463 (-)
AMCG00009279 slc25a36,slc25a36a,LOC107706334,LOC107668959,LOC108440632,LOC107694658 coding downstream 352108 31542662 ~ 31563060 (-)
AMCG00009280 spsb4,spsb4a,LOC108267127,LOC103021520,LOC108440634,LOC107743001 coding downstream 438027 31473753 ~ 31477141 (-)
AMCG00009287 NA coding upstream 3789 31919162 ~ 31919851 (-)
AMCG00009290 LOC102211227 coding upstream 25433 31940806 ~ 31953635 (-)
AMCG00009297 LOC108280899,LOC108428267,LOC107679405,LOC107567705 coding upstream 138435 32053808 ~ 32060010 (-)
AMCG00009294 NA coding upstream 151470 32066843 ~ 32083265 (-)
AMCG00009295 NA coding upstream 170429 32085802 ~ 32092762 (-)
G55861 NA non-coding downstream 1099077 30809576 ~ 30816091 (-)
G55760 NA non-coding downstream 1260147 30652912 ~ 30655021 (-)
G55722 NA non-coding downstream 1423188 30491238 ~ 30491980 (-)
G55703 NA non-coding downstream 1431795 30480779 ~ 30483373 (-)
G55648 NA non-coding downstream 1678773 30236159 ~ 30236395 (-)
G55991 NA non-coding upstream 35049 31950422 ~ 31950673 (-)
G56012 NA non-coding upstream 82704 31998077 ~ 32031970 (-)
G56163 NA non-coding upstream 885162 32800535 ~ 32800895 (-)
G56185 NA non-coding upstream 928722 32844095 ~ 32844336 (-)
G56256 sptssb non-coding upstream 1117604 33032977 ~ 33038239 (-)
AMCG00009275 NA other downstream 730202 31150912 ~ 31184966 (-)
AMCG00009269 NA other downstream 929173 30972953 ~ 30985995 (-)
G55881 NA other downstream 967957 30944367 ~ 30947211 (-)
G55878 NA other downstream 977917 30934564 ~ 30937251 (-)
AMCG00009265 NA other downstream 1257556 30599474 ~ 30657612 (-)
AMCG00009332 NA other upstream 2092230 34007603 ~ 34026160 (-)
AMCG00009333 NA other upstream 2126703 34042076 ~ 34050737 (-)
AMCG00009342 kcnab1 other upstream 2311901 34227274 ~ 34274084 (-)
G56438 kcnab1a,kcnab1,LOC107671078,LOC107675612,LOC107566585,LOC108263953 other upstream 2324111 34239484 ~ 34316008 (-)
AMCG00009347 gmps other upstream 2418888 34334261 ~ 34362341 (-)

Expression


Co-expression Network