Gene
RNA
| Item | Value |
|---|---|
| gene id | G56060 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 32161760 ~ 32165365 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU70069 | True | 797 | TUCP | 0.48 | 2 | 32161760 | 32165365 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009293 | NA | coding | upstream | 42564 | 32115478 ~ 32119196 (+) |
| AMCG00009289 | NA | coding | upstream | 95061 | 32060813 ~ 32066699 (+) |
| AMCG00009291 | NA | coding | upstream | 109367 | 32050504 ~ 32052393 (+) |
| AMCG00009292 | NA | coding | upstream | 152672 | 32008564 ~ 32009088 (+) |
| AMCG00009288 | acsl3b,LOC107567703,LOC106568845,LOC107745612 | coding | upstream | 162674 | 31968819 ~ 31999086 (+) |
| AMCG00009298 | NA | coding | downstream | 17760 | 32183125 ~ 32196353 (+) |
| AMCG00009304 | NA | coding | downstream | 356153 | 32521518 ~ 32533407 (+) |
| AMCG00009305 | gfm1 | coding | downstream | 368512 | 32533877 ~ 32548495 (+) |
| AMCG00009306 | NA | coding | downstream | 388297 | 32553662 ~ 32564937 (+) |
| AMCG00009308 | NA | coding | downstream | 407574 | 32572939 ~ 32752465 (+) |
| G56021 | NA | non-coding | upstream | 104278 | 32053787 ~ 32057482 (+) |
| G55929 | NA | non-coding | upstream | 609598 | 31548531 ~ 31552162 (+) |
| G55926 | NA | non-coding | upstream | 614528 | 31542621 ~ 31547232 (+) |
| G55807 | NA | non-coding | upstream | 998609 | 31155518 ~ 31163151 (+) |
| G55800 | NA | non-coding | upstream | 1211551 | 30947366 ~ 30950209 (+) |
| G56062 | NA | non-coding | downstream | 1500 | 32166865 ~ 32168048 (+) |
| G56064 | cul3,LOC100710156,LOC107384027 | non-coding | downstream | 8942 | 32174307 ~ 32179259 (+) |
| G56120 | NA | non-coding | downstream | 382642 | 32548007 ~ 32553904 (+) |
| G56211 | ppm1l,LOC108430727,LOC105935930 | non-coding | downstream | 782772 | 32948137 ~ 32950966 (+) |
| G56261 | NA | non-coding | downstream | 941005 | 33106370 ~ 33106621 (+) |
| G55591 | NA | other | upstream | 2166322 | 29995126 ~ 29995438 (+) |
| G55573 | NA | other | upstream | 2250196 | 29907911 ~ 29911564 (+) |
| AMCG00009220 | lsm2,LSM2,smx5 | other | upstream | 2987029 | 29171323 ~ 29174731 (+) |
| AMCG00009208 | NA | other | upstream | 3053533 | 29103608 ~ 29108227 (+) |
| AMCG00009207 | rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 | other | upstream | 3149992 | 28928892 ~ 29011768 (+) |
| G56368 | NA | other | downstream | 1835431 | 34000796 ~ 34031445 (+) |
| G56369 | NA | other | downstream | 1850305 | 34015670 ~ 34018815 (+) |
| AMCG00009345 | NA | other | downstream | 2198054 | 34363419 ~ 34369257 (+) |
| G56536 | LOC100846954 | other | downstream | 3223549 | 35388914 ~ 35389327 (+) |
| AMCG00009404 | NA | other | downstream | 5128538 | 37293903 ~ 37297009 (+) |
