G56262


Basic Information

Item Value
gene id G56262
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 33109739 ~ 33110019 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU70327
cctggtctgatgaatcacgagttcaaggtgttgacttggcctccaaattccccagatctcaatccaatcgagcatctgtgggatgtgctggacaaacaagtccgatccatggaggccccacctcgcaacttacaggacttaaaggatctgctgctaacgtcttggtgccagataccacagcacaccttcagaggtctagtggagtccatgcctcgacgggtcagggctgttttggcggcaaaagggggacttacacaatattaggcaggtggtcataatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70327 True 281 lncRNA 0.52 1 33109739 33110019

Neighbor

gene id symbol gene type direction distance location
AMCG00009317 NA coding upstream 54251 33050004 ~ 33055488 (+)
AMCG00009318 nmd3 coding upstream 93168 33005975 ~ 33016571 (+)
AMCG00009313 LOC107702994 coding upstream 186301 32907934 ~ 32923438 (+)
AMCG00009312 NA coding upstream 261866 32847550 ~ 32847873 (+)
AMCG00009309 LOC106612913,LOC106580942,LOC103369651,LOC102193686 coding upstream 309298 32783131 ~ 32800441 (+)
AMCG00009319 NA coding downstream 146450 33256469 ~ 33257811 (+)
AMCG00009320 NA coding downstream 327667 33437686 ~ 33451270 (+)
AMCG00009323 slitrk3,LOC107570382,LOC107705787,LOC107600237 coding downstream 405918 33515937 ~ 33520985 (+)
AMCG00009324 NA coding downstream 424355 33534374 ~ 33577599 (+)
AMCG00009329 NA coding downstream 881589 33991608 ~ 34001073 (+)
G56261 NA non-coding upstream 3118 33106370 ~ 33106621 (+)
G56211 ppm1l,LOC108430727,LOC105935930 non-coding upstream 158773 32948137 ~ 32950966 (+)
G56120 NA non-coding upstream 555835 32548007 ~ 32553904 (+)
G56064 cul3,LOC100710156,LOC107384027 non-coding upstream 930480 32174307 ~ 32179259 (+)
G56062 NA non-coding upstream 941691 32166865 ~ 32168048 (+)
G56268 NA non-coding downstream 171518 33281537 ~ 33281764 (+)
G56282 NA non-coding downstream 346872 33456891 ~ 33457172 (+)
G56376 NA non-coding downstream 928115 34038134 ~ 34042259 (+)
G56379 NA non-coding downstream 935471 34045490 ~ 34078839 (+)
G56474 NA non-coding downstream 1472928 34582947 ~ 34662345 (+)
G56060 NA other upstream 944374 32161760 ~ 32165365 (+)
G55591 NA other upstream 3114301 29995126 ~ 29995438 (+)
G55573 NA other upstream 3198175 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 3935008 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 4001512 29103608 ~ 29108227 (+)
G56368 NA other downstream 890777 34000796 ~ 34031445 (+)
G56369 NA other downstream 905651 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 1253400 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 2278895 35388914 ~ 35389327 (+)
AMCG00009404 NA other downstream 4183884 37293903 ~ 37297009 (+)

Expression


Co-expression Network