Gene
RNA
| Item | Value |
|---|---|
| gene id | G56268 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 33281537 ~ 33281764 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008190 | eukaryotic initiation factor 4E binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU70333 | True | 228 | lncRNA | 0.38 | 1 | 33281537 | 33281764 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009319 | NA | coding | upstream | 23726 | 33256469 ~ 33257811 (+) |
| AMCG00009317 | NA | coding | upstream | 226049 | 33050004 ~ 33055488 (+) |
| AMCG00009318 | nmd3 | coding | upstream | 264966 | 33005975 ~ 33016571 (+) |
| AMCG00009313 | LOC107702994 | coding | upstream | 358099 | 32907934 ~ 32923438 (+) |
| AMCG00009312 | NA | coding | upstream | 433664 | 32847550 ~ 32847873 (+) |
| AMCG00009320 | NA | coding | downstream | 155922 | 33437686 ~ 33451270 (+) |
| AMCG00009323 | slitrk3,LOC107570382,LOC107705787,LOC107600237 | coding | downstream | 234173 | 33515937 ~ 33520985 (+) |
| AMCG00009324 | NA | coding | downstream | 252610 | 33534374 ~ 33577599 (+) |
| AMCG00009329 | NA | coding | downstream | 709844 | 33991608 ~ 34001073 (+) |
| AMCG00009330 | NA | coding | downstream | 719759 | 34001523 ~ 34005647 (+) |
| G56262 | NA | non-coding | upstream | 171518 | 33109739 ~ 33110019 (+) |
| G56261 | NA | non-coding | upstream | 174916 | 33106370 ~ 33106621 (+) |
| G56211 | ppm1l,LOC108430727,LOC105935930 | non-coding | upstream | 330571 | 32948137 ~ 32950966 (+) |
| G56120 | NA | non-coding | upstream | 727633 | 32548007 ~ 32553904 (+) |
| G56064 | cul3,LOC100710156,LOC107384027 | non-coding | upstream | 1102278 | 32174307 ~ 32179259 (+) |
| G56282 | NA | non-coding | downstream | 175127 | 33456891 ~ 33457172 (+) |
| G56376 | NA | non-coding | downstream | 756370 | 34038134 ~ 34042259 (+) |
| G56379 | NA | non-coding | downstream | 763726 | 34045490 ~ 34078839 (+) |
| G56474 | NA | non-coding | downstream | 1301183 | 34582947 ~ 34662345 (+) |
| G56495 | NA | non-coding | downstream | 1680990 | 34962754 ~ 34963224 (+) |
| G56060 | NA | other | upstream | 1116172 | 32161760 ~ 32165365 (+) |
| G55591 | NA | other | upstream | 3286099 | 29995126 ~ 29995438 (+) |
| G55573 | NA | other | upstream | 3369973 | 29907911 ~ 29911564 (+) |
| AMCG00009220 | lsm2,LSM2,smx5 | other | upstream | 4106806 | 29171323 ~ 29174731 (+) |
| AMCG00009208 | NA | other | upstream | 4173310 | 29103608 ~ 29108227 (+) |
| G56368 | NA | other | downstream | 719032 | 34000796 ~ 34031445 (+) |
| G56369 | NA | other | downstream | 733906 | 34015670 ~ 34018815 (+) |
| AMCG00009345 | NA | other | downstream | 1081655 | 34363419 ~ 34369257 (+) |
| G56536 | LOC100846954 | other | downstream | 2107150 | 35388914 ~ 35389327 (+) |
| AMCG00009404 | NA | other | downstream | 4012139 | 37293903 ~ 37297009 (+) |
