G56542


Basic Information

Item Value
gene id G56542
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 35575046 ~ 35576926 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU70680
GTCCTGTGTGGGCAGGTAAAGAAGATAAGgTGCCAGAATCaatctgcagtgagagctgccttcCTGGGACTCGTAAAGCAACTATAAAAGGAAAGccaatctgctgctttgactgcattccatgtgctgagggagaagtcagtaatacaacagATTCAGTGGATTGTACAACATGCCCATTGGATTACAGATCAAATGAACAAAGAAATGGgtgtatattcaaaaatattgagtttttgtctttttcagaaTTCATGGGAATACTATTAgtaacattttctatatttggAGCTTGCCTTACATTAACAATAGCtgtaatatttttcagaaacagATATACCCCAATAGTGAgagccaataactctgagcttagtttcctcctgctcttctcattaactctgtgtttcctttgctctcttactttcatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70680 True 428 lncRNA 0.38 3 35575046 35576926

Neighbor

gene id symbol gene type direction distance location
AMCG00009372 NA coding upstream 482160 35085474 ~ 35092886 (+)
AMCG00009371 NA coding upstream 508714 35062938 ~ 35066332 (+)
AMCG00009370 NA coding upstream 634419 34936048 ~ 34940627 (+)
AMCG00009369 NA coding upstream 689100 34867644 ~ 34885946 (+)
AMCG00009368 NA coding upstream 709406 34844468 ~ 34865640 (+)
AMCG00009375 NA coding downstream 269044 35845970 ~ 35846681 (+)
AMCG00009377 NA coding downstream 627884 36204810 ~ 36205884 (+)
AMCG00009376 NA coding downstream 628959 36205885 ~ 36206498 (+)
AMCG00009378 NA coding downstream 833132 36410058 ~ 36417003 (+)
AMCG00009380 NA coding downstream 938268 36515194 ~ 36515726 (+)
G56541 LOC103376870 non-coding upstream 35239 35538887 ~ 35539807 (+)
G56501 NA non-coding upstream 507817 35020234 ~ 35067229 (+)
G56495 NA non-coding upstream 611822 34962754 ~ 34963224 (+)
G56474 NA non-coding upstream 912701 34582947 ~ 34662345 (+)
G56379 NA non-coding upstream 1496207 34045490 ~ 34078839 (+)
G56567 NA non-coding downstream 293902 35870828 ~ 35871040 (+)
G56582 NA non-coding downstream 349012 35925938 ~ 35926195 (+)
G56584 NA non-coding downstream 350446 35927372 ~ 36034695 (+)
G56623 NA non-coding downstream 899512 36476438 ~ 36479375 (+)
G56629 NA non-coding downstream 1050269 36627195 ~ 36631814 (+)
G56536 LOC100846954 other upstream 185719 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 1205789 34363419 ~ 34369257 (+)
G56368 NA other upstream 1543601 34000796 ~ 34031445 (+)
G56369 NA other upstream 1556231 34015670 ~ 34018815 (+)
G56060 NA other upstream 3409681 32161760 ~ 32165365 (+)
AMCG00009404 NA other downstream 1716977 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 1771182 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 1845091 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 1953896 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 2031379 37608305 ~ 37616696 (+)

Expression


Co-expression Network