G56742


Basic Information

Item Value
gene id G56742
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 37167994 ~ 37168244 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU70924
ctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacacttttgacaatataccctaacatcctgtttgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70924 True 251 lncRNA 0.46 1 37167994 37168244

Neighbor

gene id symbol gene type direction distance location
AMCG00009394 NA coding downstream 70667 37088783 ~ 37097327 (-)
AMCG00009390 mbnl1 coding downstream 246855 36900293 ~ 36921139 (-)
AMCG00009391 p2ry1 coding downstream 293265 36873672 ~ 36874729 (-)
AMCG00009389 rap2b coding downstream 327657 36840116 ~ 36840337 (-)
AMCG00009388 NA coding downstream 400274 36733179 ~ 36767720 (-)
AMCG00009407 NA coding upstream 107218 37275462 ~ 37277549 (-)
AMCG00009411 NA coding upstream 110642 37278886 ~ 37279752 (-)
AMCG00009406 tsc22d2,LOC107097579,LOC107727513,LOC105899227 coding upstream 132284 37300528 ~ 37305420 (-)
AMCG00009412 LOC103360179 coding upstream 158511 37326755 ~ 37332027 (-)
AMCG00009416 rnf13,LOC106613488,LOC107551383 coding upstream 191841 37360085 ~ 37402881 (-)
G56710 p2ry1 non-coding downstream 296171 36869548 ~ 36871823 (-)
G56612 NA non-coding downstream 774476 36096808 ~ 36393518 (-)
G56611 NA non-coding downstream 1062575 36080635 ~ 36105419 (-)
G56570 NA non-coding downstream 1278312 35889450 ~ 35889682 (-)
G56564 NA non-coding downstream 1353780 35782424 ~ 35814214 (-)
G56795 NA non-coding upstream 32788 37201032 ~ 37267831 (-)
G56818 tsc22d2,LOC105899227 non-coding upstream 132300 37300544 ~ 37367669 (-)
G56831 LOC106583953,LOC106560594 non-coding upstream 250170 37418414 ~ 37422521 (-)
G56861 NA non-coding upstream 347725 37515969 ~ 37517654 (-)
G56927 NA non-coding upstream 468461 37636705 ~ 37734188 (-)
G56568 NA other downstream 1295397 35872123 ~ 35872597 (-)
G56546 LOC103376870 other downstream 1628184 35538887 ~ 35539810 (-)
AMCG00009347 gmps other downstream 2805653 34334261 ~ 34362341 (-)
G56438 kcnab1a,kcnab1,LOC107671078,LOC107675612,LOC107566585,LOC108263953 other downstream 2851986 34239484 ~ 34316008 (-)
AMCG00009342 kcnab1 other downstream 2893910 34227274 ~ 34274084 (-)
G56800 NA other upstream 47716 37215960 ~ 37220076 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other upstream 112304 37280548 ~ 37285365 (-)
AMCG00009408 NA other upstream 117332 37285576 ~ 37394988 (-)
AMCG00009417 NA other upstream 299010 37467254 ~ 37476035 (-)
AMCG00009437 NA other upstream 721258 37889502 ~ 37908968 (-)

Expression


Co-expression Network