G56775


Basic Information

Item Value
gene id G56775
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 37285843 ~ 37291665 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU70962
GTTCAAAGGTATTCCTTTAATATTTGTCTGAAGTTGTCCAGGTCATATAAATGACATTACAGATTTGTACCAAATATACTAAAACTATTTCAATCTATTGCTTCAGTTTCCAAATCCTTGTACAGGGCAAAAGTTTAAGTATATACAGTCCCAATGCATTCCTGGGATCAATCTGCAAAGCTTAAACATACATCGCATAGCATTATCATCCTGTGATAAAGTCGAATACTTGTTTATGGCTCAAACATTTACCCAAATGAATGACGATTAATGggttgttttcattatttgttgtaTGACTTGTATTCAGTGTATTCagtgtattgaaaaatataacacTATGCAGCATTATCAATGGAGGCAACATCCAGTGAAAATCtggaattaaatacatagaTCCTGCAATGCTTTATAGTGTTTGGGTATAGCAAAtggcaaaatattgttttttttgttttgattatatgCCTAACTCCAGATCCTCCAGTTCTTGCAACAACTGGGACTCCTTCTGCATCTTCTCGATCTAaaaagggagaagaaaaaaattgaaaacattgAAATCATCTATATGTGCCAATTTACCAGCCCTGCATCTTCTTCTGGTAGAAAGACTTAAGACACTCTCCACTCTGCACGTCCCACAGGTGAAGGTTTTGATCTCCGTGGGCGCTCTCTTGTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70962 True 685 lncRNA 0.36 2 37285843 37291665

Neighbor

gene id symbol gene type direction distance location
AMCG00009398 NA coding upstream 7958 37268364 ~ 37277885 (+)
AMCG00009395 siah2,LOC105023934,LOC106567892,LOC108431284,LOC106603586,LOC107587204,LOC107732330 coding upstream 19820 37262551 ~ 37266023 (+)
AMCG00009400 NA coding upstream 24439 37253939 ~ 37261404 (+)
AMCG00009397 NA coding upstream 36149 37244233 ~ 37249694 (+)
AMCG00009403 NA coding upstream 51249 37217086 ~ 37234594 (+)
AMCG00009410 NA coding downstream 6925 37298590 ~ 37302176 (+)
AMCG00009413 NA coding downstream 114183 37405848 ~ 37410371 (+)
AMCG00009414 commd2 coding downstream 122099 37413764 ~ 37417955 (+)
AMCG00009420 NA coding downstream 185525 37477190 ~ 37492489 (+)
AMCG00009418 NA coding downstream 203335 37495000 ~ 37499186 (+)
G56754 NA non-coding upstream 90755 37193726 ~ 37195088 (+)
G56747 NA non-coding upstream 97065 37188568 ~ 37188778 (+)
G56712 NA non-coding upstream 256301 37029206 ~ 37029542 (+)
G56694 NA non-coding upstream 310782 36900293 ~ 36975061 (+)
G56698 NA non-coding upstream 410445 36875078 ~ 36875398 (+)
G56982 NA non-coding downstream 772125 38063790 ~ 38068153 (+)
G56995 NA non-coding downstream 838417 38130082 ~ 38133966 (+)
G57036 NA non-coding downstream 911129 38202794 ~ 38280479 (+)
G57161 NA non-coding downstream 1336254 38627919 ~ 38628135 (+)
G57164 NA non-coding downstream 1341432 38633097 ~ 38633351 (+)
G56536 LOC100846954 other upstream 1896516 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 2916586 34363419 ~ 34369257 (+)
G56368 NA other upstream 3254398 34000796 ~ 34031445 (+)
G56369 NA other upstream 3267028 34015670 ~ 34018815 (+)
G56060 NA other upstream 5120478 32161760 ~ 32165365 (+)
AMCG00009404 NA other downstream 2238 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 56443 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 130352 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 239157 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 316640 37608305 ~ 37616696 (+)

Expression


Co-expression Network