Gene
RNA
| Item | Value |
|---|---|
| gene id | G57013 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 38118428 ~ 38118843 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU71277 | True | 416 | lncRNA | 0.41 | 1 | 38118428 | 38118843 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009448 | actl6a,LOC107709208 | coding | downstream | 12635 | 38094973 ~ 38105793 (-) |
| AMCG00009447 | NA | coding | downstream | 26272 | 38089356 ~ 38092156 (-) |
| AMCG00009441 | usp13,LOC107659032 | coding | downstream | 30304 | 38063826 ~ 38088124 (-) |
| AMCG00009439 | pde6d | coding | downstream | 164373 | 37942071 ~ 37954055 (-) |
| AMCG00009440 | phb2,LOC107591156,LOC107692360 | coding | downstream | 184783 | 37928306 ~ 37933645 (-) |
| AMCG00009446 | NA | coding | upstream | 15240 | 38134083 ~ 38146947 (-) |
| AMCG00009445 | pik3ca,LOC107574159 | coding | upstream | 36882 | 38155725 ~ 38176524 (-) |
| AMCG00009451 | NA | coding | upstream | 124364 | 38243207 ~ 38259816 (-) |
| AMCG00009452 | NA | coding | upstream | 147356 | 38266199 ~ 38271710 (-) |
| AMCG00009453 | rnf7 | coding | upstream | 160408 | 38279251 ~ 38281530 (-) |
| G56927 | NA | non-coding | downstream | 384240 | 37636705 ~ 37734188 (-) |
| G56861 | NA | non-coding | downstream | 600774 | 37515969 ~ 37517654 (-) |
| G56831 | LOC106583953,LOC106560594 | non-coding | downstream | 695907 | 37418414 ~ 37422521 (-) |
| G56818 | tsc22d2,LOC105899227 | non-coding | downstream | 750759 | 37300544 ~ 37367669 (-) |
| G56795 | NA | non-coding | downstream | 850597 | 37201032 ~ 37267831 (-) |
| G57015 | NA | non-coding | upstream | 6306 | 38125149 ~ 38125363 (-) |
| G57016 | NA | non-coding | upstream | 7138 | 38125981 ~ 38127340 (-) |
| G57017 | NA | non-coding | upstream | 8625 | 38127468 ~ 38127678 (-) |
| G57018 | LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 | non-coding | upstream | 10141 | 38128984 ~ 38129202 (-) |
| G57011 | NA | non-coding | upstream | 10452 | 38129295 ~ 38133966 (-) |
| AMCG00009437 | NA | other | downstream | 209460 | 37889502 ~ 37908968 (-) |
| AMCG00009417 | NA | other | downstream | 642393 | 37467254 ~ 37476035 (-) |
| AMCG00009408 | NA | other | downstream | 723440 | 37285576 ~ 37394988 (-) |
| AMCG00009409 | selenot,LOC107681817,LOC106599070,LOC107708642 | other | downstream | 833063 | 37280548 ~ 37285365 (-) |
| G56800 | NA | other | downstream | 898352 | 37215960 ~ 37220076 (-) |
| G57155 | dner | other | upstream | 461442 | 38580285 ~ 38582820 (-) |
| AMCG00009472 | NA | other | upstream | 709122 | 38827965 ~ 38837594 (-) |
| AMCG00009521 | gigyf2,LOC107728389 | other | upstream | 2002620 | 40121463 ~ 40157471 (-) |
| AMCG00009571 | LOC107087052,LOC105890629 | other | upstream | 3695716 | 41814559 ~ 41826934 (-) |
| AMCG00009582 | NA | other | upstream | 3922356 | 42041199 ~ 42056128 (-) |
