G57015


Basic Information

Item Value
gene id G57015
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38125149 ~ 38125363 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU71279
CTGATTTGATTCCGTAGTTGCTCCGCCTCTTGCCGTAGCTGTTCCAGTTCACTCATGGTCCCACCTGAATGCGTTCAGCCCTCGACCCGTGTCACTCAACCCTCAGGACACCTGCGGGGGACAGAGAGTGgtgaggagggggggaggggcgCGGAGGACAAGAGCCGAGGCGAGGAGTGACCCATAACAGCCCGTCGACACTgctgtctctgtcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71279 True 215 lncRNA 0.61 1 38125149 38125363

Neighbor

gene id symbol gene type direction distance location
AMCG00009448 actl6a,LOC107709208 coding downstream 19356 38094973 ~ 38105793 (-)
AMCG00009447 NA coding downstream 32993 38089356 ~ 38092156 (-)
AMCG00009441 usp13,LOC107659032 coding downstream 37025 38063826 ~ 38088124 (-)
AMCG00009439 pde6d coding downstream 171094 37942071 ~ 37954055 (-)
AMCG00009440 phb2,LOC107591156,LOC107692360 coding downstream 191504 37928306 ~ 37933645 (-)
AMCG00009446 NA coding upstream 8720 38134083 ~ 38146947 (-)
AMCG00009445 pik3ca,LOC107574159 coding upstream 30362 38155725 ~ 38176524 (-)
AMCG00009451 NA coding upstream 117844 38243207 ~ 38259816 (-)
AMCG00009452 NA coding upstream 140836 38266199 ~ 38271710 (-)
AMCG00009453 rnf7 coding upstream 153888 38279251 ~ 38281530 (-)
G57013 NA non-coding downstream 6306 38118428 ~ 38118843 (-)
G56927 NA non-coding downstream 390961 37636705 ~ 37734188 (-)
G56861 NA non-coding downstream 607495 37515969 ~ 37517654 (-)
G56831 LOC106583953,LOC106560594 non-coding downstream 702628 37418414 ~ 37422521 (-)
G56818 tsc22d2,LOC105899227 non-coding downstream 757480 37300544 ~ 37367669 (-)
G57016 NA non-coding upstream 618 38125981 ~ 38127340 (-)
G57017 NA non-coding upstream 2105 38127468 ~ 38127678 (-)
G57018 LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 non-coding upstream 3621 38128984 ~ 38129202 (-)
G57011 NA non-coding upstream 3932 38129295 ~ 38133966 (-)
G57143 LOC102787183,LOC106580884 non-coding upstream 375755 38501118 ~ 38503129 (-)
AMCG00009437 NA other downstream 216181 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 649114 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 730161 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 839784 37280548 ~ 37285365 (-)
G56800 NA other downstream 905073 37215960 ~ 37220076 (-)
G57155 dner other upstream 454922 38580285 ~ 38582820 (-)
AMCG00009472 NA other upstream 702602 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 1996100 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 3689196 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 3915836 42041199 ~ 42056128 (-)

Expression


Co-expression Network