G57016


Basic Information

Item Value
gene id G57016
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38125981 ~ 38127340 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU71280
CTGAAAATGGGACATTTTTCACGGGACAGGAAAGCACCCAGCATTTCCTCACCTTGTTTGTTGTGTAGCTGTCCCAGATAATTAGCTTGCCATCTTGAGAAGCACTGACGAGTAacctagaaaaacaaaaacacgaaGATATAGTGTTTCCGTCGTGAAGATACTGTAGTGCAGCTCATTTCCGTTCAATTCTGCAGGGGCCATGACTGCGCCTCACCTTGATCtatatatagtgccttttaAATGCAATCTCTCACCTCTGACATGGTGGTGTTTCATTGCCCATAAACGGCTCCTCAGGGCTTCAGTCAATTTCAAAAATGAGAGATATGGACATTTGGACCTACACTGAGTGGTGTGCGATTGCATTTTAGTACTATTCTGCGGTGATACTCAAGTCTCTCACACAGGGATCCTAGTTGTGCTGTTTCGCCCCCCTGTTCACTGCAGGCGGGGAAGTTACCTCATCACACCGGGCCATCTGCCGTTCAGGACCCCTGCTACACTGCTCCGGCAATTTCATAACTTATTCACGAACCACAAAATATTTCAACTCAGATAGTCGTCCAGCTTCAGGCAAAATGGCCTTCATAAATCCACAGTAATGCATCCACTCCGACtgcagccccccccaccccgatcCTAATGCCTTCCTCTTAAAAAGCACATCCGCTTGGATGTACAGCAAAACATCCATTTGTAGCACGTTGACCATAATGGAGCATTACAGAGCTAAAATGTCAACCACCGggcataaaataaacatgaggcgtaaacagtttttttcttttacttgtaCTTGCACTTGCTCTTCCCGAGGCCTGCCTGGGAAGCCAGAGTATGTGGCGAGATGAACACCAGAGCCGGAGCACCCTGGCAGAGATCTGCACTTCGGAGATGCACCTTTTATCATGGTGTCCTTAGGGAACTCATACACTGCACTCGATCCATGAAATATCTTTGGAAGTTACATCACATTAGAAGTAAAAAGATCATGGGAGGGAAAGGGCTAAAATCTGTcgtattttcatttttgctcAAATGTGGATTCCTTCTCCTAATGCTCTGTGCCTGTATGTTGCGAACAATTAAACGTAACTGATTTACACTCAACACACCCATGTGTGGGCCTGGAGGCTGACAGAATCTGTATTACATTTcgttttttggtttggtttctcAAAATAAGAGTACACGTGAAAGAAACCCCGGATCCGACCGACCCCTAGAGCTGTGACCCTGTGCTGACCTGGAGTCGGAGCCCCAGTGCATGGCGTAGATTTTGGCAAGGTGACCTCTAAGCGTGCGTCTCGTCCTCATCTGGATCCGGCCCACAGAGTCCAGGCCGGCCGTGATCTGA

Function

NR:

description
PREDICTED: putative ATP-dependent RNA helicase TDRD9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71280 True 1360 lncRNA 0.47 1 38125981 38127340

Neighbor

gene id symbol gene type direction distance location
AMCG00009448 actl6a,LOC107709208 coding downstream 20188 38094973 ~ 38105793 (-)
AMCG00009447 NA coding downstream 33825 38089356 ~ 38092156 (-)
AMCG00009441 usp13,LOC107659032 coding downstream 37857 38063826 ~ 38088124 (-)
AMCG00009439 pde6d coding downstream 171926 37942071 ~ 37954055 (-)
AMCG00009440 phb2,LOC107591156,LOC107692360 coding downstream 192336 37928306 ~ 37933645 (-)
AMCG00009446 NA coding upstream 6743 38134083 ~ 38146947 (-)
AMCG00009445 pik3ca,LOC107574159 coding upstream 28385 38155725 ~ 38176524 (-)
AMCG00009451 NA coding upstream 115867 38243207 ~ 38259816 (-)
AMCG00009452 NA coding upstream 138859 38266199 ~ 38271710 (-)
AMCG00009453 rnf7 coding upstream 151911 38279251 ~ 38281530 (-)
G57015 NA non-coding downstream 618 38125149 ~ 38125363 (-)
G57013 NA non-coding downstream 7138 38118428 ~ 38118843 (-)
G56927 NA non-coding downstream 391793 37636705 ~ 37734188 (-)
G56861 NA non-coding downstream 608327 37515969 ~ 37517654 (-)
G56831 LOC106583953,LOC106560594 non-coding downstream 703460 37418414 ~ 37422521 (-)
G57017 NA non-coding upstream 128 38127468 ~ 38127678 (-)
G57018 LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 non-coding upstream 1644 38128984 ~ 38129202 (-)
G57011 NA non-coding upstream 1955 38129295 ~ 38133966 (-)
G57143 LOC102787183,LOC106580884 non-coding upstream 373778 38501118 ~ 38503129 (-)
G57165 NA non-coding upstream 505772 38633112 ~ 38633397 (-)
AMCG00009437 NA other downstream 217013 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 649946 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 730993 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 840616 37280548 ~ 37285365 (-)
G56800 NA other downstream 905905 37215960 ~ 37220076 (-)
G57155 dner other upstream 452945 38580285 ~ 38582820 (-)
AMCG00009472 NA other upstream 700625 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 1994123 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 3687219 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 3913859 42041199 ~ 42056128 (-)

Expression


Co-expression Network