G57018 (LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449)


Basic Information

Item Value
gene id G57018
gene name LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38128984 ~ 38129202 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU71282
CACCTGCACGCTCTCCCTTCAGGGTGTCCCACACGTTGCAGTTGAAGTCGTCGTAGCCAGCGAGCAGCAGGCGGCCGCTCTTAGAGAAGGCCACGGAGGTGATGCCGCAGATTATGTTGTCGTGGGAGTACATCATCAGCTCCTGGTCCGCCCGCAGGTCGAACAGCCGGCATGTGGCGTCGTCCGAGCCCGTGGTGAAGGCGTTTCCGTTGGGGAAGA

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein subunit beta-4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71282 True 219 lncRNA 0.62 1 38128984 38129202

Neighbor

gene id symbol gene type direction distance location
AMCG00009448 actl6a,LOC107709208 coding downstream 23191 38094973 ~ 38105793 (-)
AMCG00009447 NA coding downstream 36828 38089356 ~ 38092156 (-)
AMCG00009441 usp13,LOC107659032 coding downstream 40860 38063826 ~ 38088124 (-)
AMCG00009439 pde6d coding downstream 174929 37942071 ~ 37954055 (-)
AMCG00009440 phb2,LOC107591156,LOC107692360 coding downstream 195339 37928306 ~ 37933645 (-)
AMCG00009446 NA coding upstream 4881 38134083 ~ 38146947 (-)
AMCG00009445 pik3ca,LOC107574159 coding upstream 26523 38155725 ~ 38176524 (-)
AMCG00009451 NA coding upstream 114005 38243207 ~ 38259816 (-)
AMCG00009452 NA coding upstream 136997 38266199 ~ 38271710 (-)
AMCG00009453 rnf7 coding upstream 150049 38279251 ~ 38281530 (-)
G57017 NA non-coding downstream 1306 38127468 ~ 38127678 (-)
G57016 NA non-coding downstream 1644 38125981 ~ 38127340 (-)
G57015 NA non-coding downstream 3621 38125149 ~ 38125363 (-)
G57013 NA non-coding downstream 10141 38118428 ~ 38118843 (-)
G56927 NA non-coding downstream 394796 37636705 ~ 37734188 (-)
G57011 NA non-coding upstream 93 38129295 ~ 38133966 (-)
G57143 LOC102787183,LOC106580884 non-coding upstream 371916 38501118 ~ 38503129 (-)
G57165 NA non-coding upstream 503910 38633112 ~ 38633397 (-)
G57194 NA non-coding upstream 643224 38772426 ~ 38773951 (-)
G57244 NA non-coding upstream 952219 39081421 ~ 39083424 (-)
AMCG00009437 NA other downstream 220016 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 652949 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 733996 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 843619 37280548 ~ 37285365 (-)
G56800 NA other downstream 908908 37215960 ~ 37220076 (-)
G57155 dner other upstream 451083 38580285 ~ 38582820 (-)
AMCG00009472 NA other upstream 698763 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 1992261 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 3685357 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 3911997 42041199 ~ 42056128 (-)

Expression


Co-expression Network