Gene
RNA
| Item | Value |
|---|---|
| gene id | G57155 |
| gene name | dner |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 38580285 ~ 38582820 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| dner | Predicted to enable calcium ion binding activity. Acts upstream of or within glial cell differentiation; negative regulation of glial cell proliferation; and negative regulation of neural precursor cell proliferation. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in immature eye; nervous system; neural keel; and proneural cluster. Orthologous to human DNER (delta/notch like EGF repeat containing). |
| description |
|---|
| delta and Notch-like epidermal growth factor-related receptor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU71449 | True | 1241 | TUCP | 0.38 | 2 | 38580285 | 38582820 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009459 | NA | coding | downstream | 99250 | 38474184 ~ 38481035 (-) |
| AMCG00009461 | NA | coding | downstream | 143676 | 38432575 ~ 38436609 (-) |
| AMCG00009460 | NA | coding | downstream | 165964 | 38378812 ~ 38414321 (-) |
| AMCG00009458 | NA | coding | downstream | 212752 | 38357920 ~ 38367533 (-) |
| AMCG00009455 | NA | coding | downstream | 260852 | 38317970 ~ 38319433 (-) |
| AMCG00009467 | daw1 | coding | upstream | 172030 | 38754850 ~ 38762930 (-) |
| AMCG00009471 | NA | coding | upstream | 192738 | 38775558 ~ 38810559 (-) |
| AMCG00009470 | NA | coding | upstream | 234375 | 38817195 ~ 38820080 (-) |
| AMCG00009475 | NA | coding | upstream | 326202 | 38909022 ~ 38935195 (-) |
| AMCG00009476 | NA | coding | upstream | 430022 | 39012842 ~ 39013371 (-) |
| G57143 | LOC102787183,LOC106580884 | non-coding | downstream | 77156 | 38501118 ~ 38503129 (-) |
| G57011 | NA | non-coding | downstream | 446319 | 38129295 ~ 38133966 (-) |
| G57018 | LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 | non-coding | downstream | 451083 | 38128984 ~ 38129202 (-) |
| G57017 | NA | non-coding | downstream | 452607 | 38127468 ~ 38127678 (-) |
| G57016 | NA | non-coding | downstream | 452945 | 38125981 ~ 38127340 (-) |
| G57165 | NA | non-coding | upstream | 50292 | 38633112 ~ 38633397 (-) |
| G57194 | NA | non-coding | upstream | 189606 | 38772426 ~ 38773951 (-) |
| G57244 | NA | non-coding | upstream | 498601 | 39081421 ~ 39083424 (-) |
| G57351 | NA | non-coding | upstream | 997791 | 39580611 ~ 39588074 (-) |
| G57354 | NA | non-coding | upstream | 1005866 | 39588686 ~ 39588911 (-) |
| AMCG00009437 | NA | other | downstream | 671317 | 37889502 ~ 37908968 (-) |
| AMCG00009417 | NA | other | downstream | 1104250 | 37467254 ~ 37476035 (-) |
| AMCG00009408 | NA | other | downstream | 1185297 | 37285576 ~ 37394988 (-) |
| AMCG00009409 | selenot,LOC107681817,LOC106599070,LOC107708642 | other | downstream | 1294920 | 37280548 ~ 37285365 (-) |
| G56800 | NA | other | downstream | 1360209 | 37215960 ~ 37220076 (-) |
| AMCG00009472 | NA | other | upstream | 245145 | 38827965 ~ 38837594 (-) |
| AMCG00009521 | gigyf2,LOC107728389 | other | upstream | 1538643 | 40121463 ~ 40157471 (-) |
| AMCG00009571 | LOC107087052,LOC105890629 | other | upstream | 3231739 | 41814559 ~ 41826934 (-) |
| AMCG00009582 | NA | other | upstream | 3458379 | 42041199 ~ 42056128 (-) |
| G58025 | NA | other | upstream | 4066030 | 42648850 ~ 42673707 (-) |
