G57194


Basic Information

Item Value
gene id G57194
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 38772426 ~ 38773951 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU71506
CAAAGAGGTGTGCAGCTGCCTCGACACCTCCGTTGTATAGAGTGAAGTTTTGAGAAGGTTTCTTGTCTTCCCACAGCACTTGGATGTAATTGCCAACTTGGTAGTATCCGCAGGTAGACAGGATCCACCACAGGGACCAGTAAATCAGCTGTTTTGCTGTGTAACATTTCAAGAAGTCGAACCATAACTGCTTGAGTATGCTGACAAAGCCGGTGTTCTCATGCACGACCGAGGCAGATGTGCTTCCACCCAAGTCGTTGCCACCAGTTTTCTGGGCAGTGGTTTTGTCCGTGTCTTCAGGTAATTGGATCTGCCCGTTGCCCTCTGGTGTTATACAGTTTTTCCGGTggaaaaacatgcttttttccGGCATAGGGAGGAAAAAGGAGGCTATCAACGCGATGCACGATAAGACTAATGTCATGATGAGGATGTTGTAAAACGACATGGCCTCAAAAGTTACCAGGAATTGGCCCAGCACAGACCCCACGGTGTAGCCAGCAAGCTGAATACTCCGGCAGTAACTGGTCACTTTCTGGTAGCGCTCCAGGTCTACCACACTGTAGATATATGAGAAGTATGCGATTTCGGTGGCAGTGACTACGCCGTAGAAGAACTCCATAAACTGCATGGCCAGCACTCCGTCGGCCCAGAGGAGCATTGTTGTTGTCGTAATTAAACTAAGGACTTGTAAAATGATGACTGGTTTATATCTTAAGTAGTCTGTGGCCAAGAACACTGGCAACAGGATGATGAGATAAGAGTATGTCCACACTGGAAGAATTTCATTTCCACCTGCTGTGTTGTGAGGTTTTTGTCGGGTCCTGTCAGGTATGGTATGAGAAAGGGCTCTAAAGGCTTGACCATGGAGAAGaacccatacacacacatcagagCAGTGGGGAACTGCCAGCTGGACCGGAATCTCCTGAAAGCCTCCATTTTTTGAAGATGTCTACTCCGCTGTTCTGTAGCAAAGTTATAACTGAGCAAAGGTATTGTAAGGTACTCTGCTTTTCTCCCcacacatttccttttctattgTGTGAAAGCAAATGCGCAGCTGCTTCCTGTCTTACTAATACAACTGCGAAGT

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU71506 True 1096 lncRNA 0.47 2 38772426 38773951

Neighbor

gene id symbol gene type direction distance location
AMCG00009467 daw1 coding downstream 9496 38754850 ~ 38762930 (-)
AMCG00009459 NA coding downstream 291391 38474184 ~ 38481035 (-)
AMCG00009461 NA coding downstream 335817 38432575 ~ 38436609 (-)
AMCG00009460 NA coding downstream 358105 38378812 ~ 38414321 (-)
AMCG00009458 NA coding downstream 404893 38357920 ~ 38367533 (-)
AMCG00009471 NA coding upstream 1607 38775558 ~ 38810559 (-)
AMCG00009470 NA coding upstream 43244 38817195 ~ 38820080 (-)
AMCG00009475 NA coding upstream 135071 38909022 ~ 38935195 (-)
AMCG00009476 NA coding upstream 238891 39012842 ~ 39013371 (-)
AMCG00009478 LOC107577679 coding upstream 492245 39266196 ~ 39271483 (-)
G57165 NA non-coding downstream 139029 38633112 ~ 38633397 (-)
G57143 LOC102787183,LOC106580884 non-coding downstream 269297 38501118 ~ 38503129 (-)
G57011 NA non-coding downstream 638460 38129295 ~ 38133966 (-)
G57018 LOC107653516,LOC107558362,LOC107706720,LOC107564248,LOC107705311,LOC107550449 non-coding downstream 643224 38128984 ~ 38129202 (-)
G57017 NA non-coding downstream 644748 38127468 ~ 38127678 (-)
G57244 NA non-coding upstream 307470 39081421 ~ 39083424 (-)
G57351 NA non-coding upstream 806660 39580611 ~ 39588074 (-)
G57354 NA non-coding upstream 814735 39588686 ~ 39588911 (-)
G57379 NA non-coding upstream 1032684 39806635 ~ 39806927 (-)
G57400 NA non-coding upstream 1100020 39873971 ~ 39874229 (-)
G57155 dner other downstream 189606 38580285 ~ 38582820 (-)
AMCG00009437 NA other downstream 863458 37889502 ~ 37908968 (-)
AMCG00009417 NA other downstream 1296391 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 1377438 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 1487061 37280548 ~ 37285365 (-)
AMCG00009472 NA other upstream 54014 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 1347512 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 3040608 41814559 ~ 41826934 (-)
AMCG00009582 NA other upstream 3267248 42041199 ~ 42056128 (-)
G58025 NA other upstream 3874899 42648850 ~ 42673707 (-)

Expression


Co-expression Network