G57430


Basic Information

Item Value
gene id G57430
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 39948006 ~ 39949200 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU71802
TCCTCCTCGTTGTCGGAGTCGCTGTCACTGCCGAACAGCTCCTTCTCGTCCTTCTTCTCCGCTTCAGCCTTCCCGCCCTCCTCCGCCTCTTCATCCTCGCTGTCTGACCCCAGGACCTTGGCCTTTGGGGGAGCCGGTTTGGGCGATGAGTCGCTGTCCGAATCCTCCCCGTCCGACACCACACGACTCTTCTTCACAGGAGTGgattcctccttctcctcatcCTCGCTGTCTGACAGGAtggctttctttctcttcaCTGGTTTgtcctgctcttcctcctcgtCGCTGTCGGCCAGTTTGCGTCGCTTGTGGCTCTGGTTTTCCTCGTTGTCGCTGTCCGCCGCCTTGGCCTCGTCTTCGCTGTCCAAGGCCCCCGCTGCCTTGGTCTCCACTCCGTTCTCCTTGTCGCTGTCCGCCTCGTCATCGGACTGTATCCGCCTCCTGCGCTTGGGCGCCTCATTCTCAGAGTCACTGCCTCTCTCCCGGGGTGCCTCATCGTTATCCGATCGGCTATCCCGACGAGGCGGTGCCGGCTCCTCATTCTCAGAGTCACTGCCCCGGCGTTTGGGCTCCTCCTCGTTCTCAGAGTCACTGGCCTGCTTGCTCGGCTCCTCCTCGTTGTCCGAGTGGCCGCCTGTGGGTTTGGGAGCGTCCTCTGCCTCGGAGTCGCTATCTGCACGTTTGGGAGCCTCCTCTCCGTCCGAGTCGCTGTCGTGCTGTGGGGGTGCATCGTCCTCCTTTTCGGAGTCGCTGTCCCTTGCCTGGGGTGCATCCTCGTTTTCAGAATCGCTGGCTAGGCCGTTCCTCTGAGCGGAGGGGCCGTCACCTTCTGCATCGCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71802 True 844 TUCP 0.62 3 39948006 39949200

Neighbor

gene id symbol gene type direction distance location
AMCG00009505 NA coding upstream 9725 39930146 ~ 39938281 (+)
AMCG00009506 NA coding upstream 17873 39922934 ~ 39930133 (+)
AMCG00009504 dgkd coding upstream 25898 39884002 ~ 39922108 (+)
AMCG00009498 NA coding upstream 75284 39865728 ~ 39872722 (+)
AMCG00009495 atg16l1,LOC107689588,LOC107551872 coding upstream 84825 39845409 ~ 39863181 (+)
AMCG00009503 NA coding downstream 18097 39967297 ~ 39982047 (+)
AMCG00009510 polr2d,rpb4,LOC106612892,LOC107671669 coding downstream 72881 40022081 ~ 40025439 (+)
AMCG00009512 NA coding downstream 79592 40028792 ~ 40029460 (+)
AMCG00009509 NA coding downstream 122039 40071239 ~ 40072287 (+)
AMCG00009515 NA coding downstream 191269 40140469 ~ 40142280 (+)
G57428 NA non-coding upstream 4970 39941222 ~ 39943036 (+)
G57401 NA non-coding upstream 72836 39874881 ~ 39875170 (+)
G57378 NA non-coding upstream 141078 39806583 ~ 39806928 (+)
G57329 NA non-coding upstream 488330 39459398 ~ 39459676 (+)
G57287 NA non-coding upstream 641232 39306488 ~ 39306774 (+)
G57457 NA non-coding downstream 81346 40030546 ~ 40033333 (+)
G57523 NA non-coding downstream 210209 40159409 ~ 40159626 (+)
G57544 NA non-coding downstream 390182 40339382 ~ 40343381 (+)
G57597 NA non-coding downstream 879872 40829072 ~ 40829677 (+)
G57599 NA non-coding downstream 983767 40932967 ~ 40933210 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 510989 39434900 ~ 39437017 (+)
G57105 NA other upstream 1490414 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 2331310 37608305 ~ 37616696 (+)
AMCG00009429 NA other upstream 2342882 37530822 ~ 37605124 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 2484501 37422017 ~ 37463505 (+)
AMCG00009516 NA other downstream 137274 40086474 ~ 40105052 (+)
G57604 NA other downstream 1041602 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 1647029 41596229 ~ 41599124 (+)
G57830 NA other downstream 2086818 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 3487790 43436990 ~ 43444420 (+)

Expression


Co-expression Network