G57597


Basic Information

Item Value
gene id G57597
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40829072 ~ 40829677 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72028
ctgaaaactcataggtcaattggtttctcttttaagattctttttagagggaagatgcggtcaagtcacagatgtgcaataatcatttattttgacaaaaataggaaactaatatcattcaattatattactgaaaataagtaatattaagcttctgatggattacagtaagaaacagataatacgcattttcttctttctcctcacagtacagcttataggccagtctggtcagccaggaagcggtgtgtctctctctgtctctcctctccagctctgtcttgtgtctcgttgcaggatgaagaagttaagagaactcaaattctctttgttttcccttttataaggtttccttccaaccaatagcattttgccaccaccatgacttgggtgccttatgctaaagtaatttagaagtgggggtcattttgaatttggctaggagccaatcagaggacaggtccctttttggtctctggtcataaagatagggttaccagggctaccaggggctaccagggaacttagataaaatggaggaggtctgtttcctctaccaaaccagatggtatagaatttcccatagaaaaatatattctaacaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72028 True 606 lncRNA 0.39 1 40829072 40829677

Neighbor

gene id symbol gene type direction distance location
AMCG00009536 LOC104966469,LOC106907045,LOC107600086,LOC103359190 coding upstream 117581 40705526 ~ 40711491 (+)
AMCG00009535 LOC106599529,LOC106568848,LOC103359190,LOC108430182 coding upstream 134692 40677853 ~ 40694380 (+)
AMCG00009534 LOC106599529,LOC105018039 coding upstream 176254 40644394 ~ 40652818 (+)
AMCG00009533 LOC107384019,LOC106568850 coding upstream 220959 40607136 ~ 40608113 (+)
AMCG00009526 NA coding upstream 366173 40448819 ~ 40462899 (+)
AMCG00009539 NA coding downstream 224901 41054578 ~ 41067629 (+)
AMCG00009543 NA coding downstream 261372 41091049 ~ 41091910 (+)
AMCG00009541 NA coding downstream 277036 41106713 ~ 41116745 (+)
AMCG00009544 NA coding downstream 287144 41116821 ~ 41117376 (+)
AMCG00009542 eif4e2,LOC107730458,LOC107692895 coding downstream 294045 41123722 ~ 41132114 (+)
G57544 NA non-coding upstream 485691 40339382 ~ 40343381 (+)
G57523 NA non-coding upstream 669446 40159409 ~ 40159626 (+)
G57457 NA non-coding upstream 795739 40030546 ~ 40033333 (+)
G57428 NA non-coding upstream 886036 39941222 ~ 39943036 (+)
G57401 NA non-coding upstream 953902 39874881 ~ 39875170 (+)
G57599 NA non-coding downstream 103290 40932967 ~ 40933210 (+)
G57690 NA non-coding downstream 670287 41499964 ~ 41500218 (+)
G57770 NA non-coding downstream 919878 41749555 ~ 41750144 (+)
G57775 NA non-coding downstream 986244 41815921 ~ 41817795 (+)
G57792 NA non-coding downstream 1009488 41839165 ~ 41839466 (+)
AMCG00009516 NA other upstream 724020 40086474 ~ 40105052 (+)
G57430 NA other upstream 879872 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 1392055 39434900 ~ 39437017 (+)
G57105 NA other upstream 2371480 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 3212376 37608305 ~ 37616696 (+)
G57604 NA other downstream 161125 40990802 ~ 40994659 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 766552 41596229 ~ 41599124 (+)
G57830 NA other downstream 1206341 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 2607313 43436990 ~ 43444420 (+)
G58324 NA other downstream 3103275 43932952 ~ 43935762 (+)

Expression


Co-expression Network