G57604


Basic Information

Item Value
gene id G57604
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 40990802 ~ 40994659 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72035
tattgtttttggtaCAAAACAGTGAACATTTACATTCCaagtacagaaaaaacacaataggCTGTTTATCATATTTATTCTCCTGTATCCATTTATCCAccattttttacttttgaaattaaataatttaggcTTTACCCAAATTAATAAAGCTACCGTATGTTAGCACCTTTTTAATTGCAGCACGTCCTAAGCGATGGTCGTGTTCTTCAAGTATGTGttcattatcaatattattcctattattgtagatgataataatgataataataaaatattgctaCTTATTTTTGCCAAATATAAGTTTTTTCTTGTCTTCGCTAATTTAATCTGTTCCAATAAACTGAAATTAGCATATATGCACATTGTTACATCACTGAAAACACAATGATGTGAcccataaataaaaaaagtatgatGAATAATTTGTAGACAGCAGTGCTATGTGGTATTATTGATAAGGCCCGGAGAAATACGATGAATTTTTCTGAAAATCATGTCAATGTCGCGGGTATGCACGgaactaatacattttgtgtactTTATTGGTGTGATTTTGGCAGTAATCTCTCAAGCACTTGATTGTATGGTTTGGACATGTACTACACATTGTCAGAAGTAAatagtttacaaacgagagtaggccattcaacccatcaaaGTCAACTTCAGACTTATTCCGACACTACACAACAGCTTGTGCAACTGTATTGTAAGTCTGTAGGTAAACTGTATCAGATTCAGTCAGATTCGCAGTTTAGtccttgcaaaacaaacaacatgtgTAACACATCCTGATCCTAGGCATGGTTGATTTGTCAGTgactacagacacacagtcaggCTGCATCAGCAATTCCTTCATCTCCTGCAGGTGACGCCAAAATGTAGGGAGTTTTGTACTTCTCGTGTTTCGGTGGACTTTTGAAACAAGAaagttattgttgtttgtttctttgccagAGCTGCAGTTGCTGTACTGGATTCAGTTTTGGTTTTCTATGTCGGTAAAAACTGGAATCAAGATGCCGCTCAACAGTTTTCTGTAGTGATCTACAGTAACATTACAGGGCGTACAGAAGAACTGACCTCGGTGGCTCTGCAAGACTCCTGGTGGATATCGCTTTACATGATCGACTGCAGACATGTTTCGCTGTTTTTGAGACATCCACTTCTTGATCGTGTTAGTGTACAATTCAAAAGTCACATGACAAGAATCACAGCGTTTGGCTAATTTCAAGATTTCCGTACACTCCGCGAAAGAGCAATTTTCTCAGGGCCTTAATTATTGTACACATTTAGcttgcaaatacattttggtttaaactcaaattaagaattacaaaaaacatcaaagcGTCGCCAGTAACTAAAATGGCACTAACCAACAATGCTACTATATTCCCAGAATACAAAACTACTGACCTTTAGTCGACCCTTCATAAAACTGCATTTCTACATTACAATCATTCACTATAAGAGCCTCCACCATAGAGTACATGGTCCTCAAATGTAAACATCTTCTAGCGATGAATGGTGTTAAATAGCAGTAGTTCATGTGTGTACACAGAAATAGCCCTAATAAATGGTAGATGTTAAAGCTCAGCTCATACAGCTGGCTCTGtttaaaacactgtttataGAGTTATCCGTCACTGCTGTACTCCTCAGGAGTTAAGCAGGCCTTTTTATTTGGAGAACTAGGCTCTTCACCCAGGAACGCACACATGGATGATCTTTTGACAGCAGGCTCAGAGATGAAGCCCATCTGCTCAAAACAGTACAGGCTGACAGCAGCCTGGGGATCATAGACATCCGGTTCAGGGCCCTCCACCGAGATCCTGGTCAGATACTCCAGGGTGCTGATGGACATCTTGCCCCTGCTCTCGGCCTTCAGGCGGGCTACAGCGGAGAAGCCCCACTCCAGCACCACGCTGGACACGGGAAAGCAGTGGAGGATGTGGATGACATGGTAGAAGTTGGGAAAGCGTGCCCGCTCTCTGGTCAAAATATTCTGCCACATCTGTTGACTGGAGAGCTCAGCCAGGCACGAGGAGCGGAGCTGCTTGAACTGCTCCCACTCCTCCAGCAATTTGGTGATGTCCACCTGGTTGAGTGACAGGAGCTTGGCAAAGTGGCGGCAGAATATCTGAAGCTCTGCGTTGCCGAAGTTCTCCATGTCTTCCTTGGTTTCAGGCCACAGGTCAGCCTCCAAGATCTTCAGGCAGCGGATGGGCTCCATTTGATGTAGGGCCCCGAAGCGTTGGAGGATACAGCCGGACACTGCAGCCACGTACGTTGGAAGCTTATCCTTGAACGCCTGGGCTGCCTCTGCTTCACACTGCAATCGGGTGCCGCTGAAGTAAACTGACTGGGGGTCCTTCGCCATGTCGTCCAACAGCTCGTGGAGGGAGCCGTGGAGAATGCCCATGCTGAAGCGTGCCAGGGTGCTGTAGAACTTCTCCAGCAGAGAGGCGGTGTACACTAGGTCCACGTTGCTATTTTGCAACGAACGGGACAGCTTGGCGATGGGCTCCAGCATCTCAGAGAAGAGGAGCAAGTGAAGGACAAAGTTGAGGCTCCGCAGGGTCCTCAGGTACTCCTGGAAGATGGTCTTCTCTTTGGGCAGGGCTGTTTGGGCAGACATGTTGGTCAGGTTACAGACAACTGCTGGGTATGCCTGCAGCAGAGCCCTGGTGGCGCGCTGCTTGTGTTGCACCCAGCGGGTTCCTTCAGCCTGATGGGGCTTGGTCTCGGCTTCCAGCATTACCTGCGCCAGGGTCTTCAGCTCGTGCATGCGACTGGGGCAGGTCCAGTACAGCTTGCCCAGGAGGAGGAGCATTTCATTGACGTTGTCGAAACTGGTGCCGTGGAACATCTCCTTGAGGGCCATCTCCAGGCGATGACTCACGCAGCTGAGGGAGATGAGATAAGGCATATCCTTCTGCAGGAGAGCAGTAATGTCCGCCTTCACAGTGCTGCCATCTGCCATGTAGCCCACCAGCTTCCGCTCGATGTCAACGCCCTCCTCTAAGAAGGCGTTGAGCACAGTCCGCTTCAGGCACTCTGGATGCACGTGCTCCACCTCCCGGAAACCGAAGAACCGCATGCAGGGCAGACCGGTGCGGTCCACGTACAGCACATAGACCATGCCTTTCTCGGTCATCCCTGGATCAGCTGAGCCATCGACCACAACCGAGAAGTACGGGGCCTCCTGGATGGCGTGCACGAGTTCCGTCCTGGTGGACCGGCCGATGTAGTCGATGTACTCCTTGCACTTCTGCTCGGTGATGGCCGTCTGGCCCAAGTCCACCCCGTGGCGCAACTCCAGCTTAGCCAGCTGCTTGAACTTCGCCAGCGGCAGCTCCAGCTTGGCCACCGTGTAGGCGAGATCGAAGAGCCGAGTGAGATGGCTCTCTTCGATGGACTGAGCGAGTGCCGAGGGCAGGTTGGGGATATTGCCACTCAGCTTCTCCAGGGCCAAGGCCTTTTGGTGCATCTCGCTCTGAAAGTGCTTCTTCACGTTGTCCTTTTTTAAAGAGTTGCCCTCGATGCCGTTAACAAAGGCCGGGCTGAAGTTGCGCAGGTCTTTGATCTTGGCTTTGTGCTTGTTGCACAGGGCACACTGAATCTTGACCACATTGCAGCCATCGATGCCGACTTCGTACTGCAACCAGTCCTGAGCAGAATGCAGCTCCAGCTGCCACCTCTTCACCGTCTCCAATCGTAATGTCATGTTGGATGTCAGTCCCCTGTTTGTTTTTGGAGCTCAAATCAGGATCCCACTCTCCTTACGACCAAACAGGACTTCTGGGGTGTTCATGGTGCTGCTTCGGATCCAGCTTTCCAACACCAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72035 True 3858 TUCP 0.48 1 40990802 40994659

Neighbor

gene id symbol gene type direction distance location
AMCG00009536 LOC104966469,LOC106907045,LOC107600086,LOC103359190 coding upstream 279311 40705526 ~ 40711491 (+)
AMCG00009535 LOC106599529,LOC106568848,LOC103359190,LOC108430182 coding upstream 296422 40677853 ~ 40694380 (+)
AMCG00009534 LOC106599529,LOC105018039 coding upstream 337984 40644394 ~ 40652818 (+)
AMCG00009533 LOC107384019,LOC106568850 coding upstream 382689 40607136 ~ 40608113 (+)
AMCG00009526 NA coding upstream 527903 40448819 ~ 40462899 (+)
AMCG00009539 NA coding downstream 59919 41054578 ~ 41067629 (+)
AMCG00009543 NA coding downstream 96390 41091049 ~ 41091910 (+)
AMCG00009541 NA coding downstream 112054 41106713 ~ 41116745 (+)
AMCG00009544 NA coding downstream 122162 41116821 ~ 41117376 (+)
AMCG00009542 eif4e2,LOC107730458,LOC107692895 coding downstream 129063 41123722 ~ 41132114 (+)
G57599 NA non-coding upstream 57592 40932967 ~ 40933210 (+)
G57597 NA non-coding upstream 161125 40829072 ~ 40829677 (+)
G57544 NA non-coding upstream 647421 40339382 ~ 40343381 (+)
G57523 NA non-coding upstream 831176 40159409 ~ 40159626 (+)
G57457 NA non-coding upstream 957469 40030546 ~ 40033333 (+)
G57690 NA non-coding downstream 505305 41499964 ~ 41500218 (+)
G57770 NA non-coding downstream 754896 41749555 ~ 41750144 (+)
G57775 NA non-coding downstream 821262 41815921 ~ 41817795 (+)
G57792 NA non-coding downstream 844506 41839165 ~ 41839466 (+)
G57843 NA non-coding downstream 1090620 42085279 ~ 42088145 (+)
AMCG00009516 NA other upstream 885750 40086474 ~ 40105052 (+)
G57430 NA other upstream 1041602 39948006 ~ 39949200 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other upstream 1553785 39434900 ~ 39437017 (+)
G57105 NA other upstream 2533210 38442255 ~ 38457592 (+)
AMCG00009428 NA other upstream 3374106 37608305 ~ 37616696 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other downstream 601570 41596229 ~ 41599124 (+)
G57830 NA other downstream 1041359 42036018 ~ 42078241 (+)
AMCG00009647 NA other downstream 2442331 43436990 ~ 43444420 (+)
G58324 NA other downstream 2938293 43932952 ~ 43935762 (+)
G58522 NA other downstream 3391838 44386497 ~ 44407568 (+)

Expression


Co-expression Network