G57981


Basic Information

Item Value
gene id G57981
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42468308 ~ 42468602 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72493
GAGACAGTCATATGACAACCCAGAGGTCGCGGAAACGAATGTGTGTTAGCAGTCTTTACCAGCCAGACGGGTTCTATTAAAAAGCTGCGTATTGTACATGCTCATTAACTGCTTAAGTTCACAGTACGCGGCGGGAAGATCCCTACGTGTTGAGGTGTACTCTGCGGGTCCCGGGATGGGGGTCTCCGTGACCGAGTTATCGCTCCGGCTGGACGAGCTCACCATGCAGTTCATGGACCAGCTGGAGTCTCTGGAGCAGAAACGAGAGCGATTCAACTCTCTCATTGAACAGGTG

Function

GO:

id name namespace
GO:0008094 DNA-dependent ATPase activity molecular_function

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
TU72493 True 295 lncRNA 0.53 1 42468308 42468602

Neighbor

gene id symbol gene type direction distance location
AMCG00009595 NA coding upstream 4578 42446957 ~ 42463730 (+)
AMCG00009600 gpr173,LOC108265110,LOC107549979,LOC105898994,LOC107731146,LOC107678674,LOC107549585,LOC107745752 coding upstream 52763 42414205 ~ 42415545 (+)
AMCG00009594 NA coding upstream 68977 42385499 ~ 42399331 (+)
AMCG00009591 NA coding upstream 170218 42290154 ~ 42298090 (+)
AMCG00009593 NA coding upstream 187879 42275999 ~ 42280429 (+)
AMCG00009604 NA coding downstream 19835 42488437 ~ 42489969 (+)
AMCG00009606 NA coding downstream 63115 42531717 ~ 42546719 (+)
AMCG00009605 LOC107602861 coding downstream 98018 42566620 ~ 42570939 (+)
AMCG00009608 NA coding downstream 127491 42596093 ~ 42599734 (+)
AMCG00009610 NA coding downstream 139895 42608497 ~ 42628717 (+)
G57964 NA non-coding upstream 33156 42432877 ~ 42435152 (+)
G57948 NA non-coding upstream 40260 42427842 ~ 42428048 (+)
G57947 NA non-coding upstream 47485 42418590 ~ 42420823 (+)
G57946 NA non-coding upstream 49803 42418141 ~ 42418505 (+)
G57945 NA non-coding upstream 50199 42415590 ~ 42418109 (+)
G57987 NA non-coding downstream 9113 42477715 ~ 42478112 (+)
G58008 NA non-coding downstream 160937 42629539 ~ 42636453 (+)
G58123 NA non-coding downstream 469405 42938007 ~ 42938874 (+)
G58148 NA non-coding downstream 537999 43006601 ~ 43010050 (+)
G58178 NA non-coding downstream 744108 43212710 ~ 43213028 (+)
G57830 NA other upstream 390067 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 869184 41596229 ~ 41599124 (+)
G57604 NA other upstream 1473649 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 2363256 40086474 ~ 40105052 (+)
G57430 NA other upstream 2519108 39948006 ~ 39949200 (+)
AMCG00009647 NA other downstream 968388 43436990 ~ 43444420 (+)
G58324 NA other downstream 1464350 43932952 ~ 43935762 (+)
G58522 NA other downstream 1917895 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 2093175 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 2115960 44584562 ~ 44603609 (+)

Expression


Co-expression Network