G57982


Basic Information

Item Value
gene id G57982
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42468185 ~ 42468759 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72494
actgtcttatgttcttatatactATTGGTAACTGTGCCTGCTCTGACAGCACGGCTCACAACACTGAGGTCACAATCGCACAGTACTTGCCTACTTCACTGTGCCTTACTTAATCTAGTGCATGCTATTTGAGCGCACTTGTTGTAATATCTGCCCTCACCTGTTCAATGAGAGAGTTGAATCGCTCTCGTTTCTGCTCCAGAGACTCCAGCTGGTCCATGAACTGCATGGTGAGCTCGTCCAGCCGGAGCGATAACTCGGTCACGGAGACCCCCATCCCGGGACCCGCAGAGTACACCTCAACACGTAGGGATCTTCCCGCCGCGTACTGTGAACTTAAGCAGTTAATGAGCATGTACAATACGCAGCTTTTTAATAGAACCCGTCTGGCTGGTAAAGACTGCTAACACACATTCGTTTCCGCGACCTCTGGGTTGTCATATGACTGTCTCCAGCTGAGCATCGACCTCAGCCAATCCCATACACGCATACTTACTTCAAGTCTGCAACCAATCCGCGTCAACAACATAAGACCGAATGACAACCAATCATCGTGCACGCCGCGGAGAACGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72494 True 575 lncRNA 0.50 1 42468185 42468759

Neighbor

gene id symbol gene type direction distance location
AMCG00009597 NA coding downstream 24117 42435235 ~ 42444068 (-)
AMCG00009598 NA coding downstream 38198 42429603 ~ 42429987 (-)
AMCG00009599 NA coding downstream 38599 42424928 ~ 42429586 (-)
AMCG00009592 NA coding downstream 133637 42326869 ~ 42334548 (-)
AMCG00009589 NA coding downstream 214083 42243388 ~ 42254102 (-)
AMCG00009596 NA coding upstream 6127 42474886 ~ 42475964 (-)
AMCG00009601 NA coding upstream 42077 42510836 ~ 42517883 (-)
AMCG00009603 NA coding upstream 68469 42537228 ~ 42537555 (-)
AMCG00009602 NA coding upstream 76869 42545628 ~ 42547223 (-)
AMCG00009612 NA coding upstream 131339 42600098 ~ 42607648 (-)
G57873 NA non-coding downstream 262626 42205270 ~ 42205559 (-)
G57858 LOC103374679,LOC100699862,LOC108250355,LOC107390564,LOC106535138,LOC106904453 non-coding downstream 292478 42173258 ~ 42175707 (-)
G57600 NA non-coding downstream 1534975 40932965 ~ 40933210 (-)
G57596 NA non-coding downstream 1691101 40721431 ~ 40777084 (-)
G57545 NA non-coding downstream 2124706 40339347 ~ 40343479 (-)
G57988 NA non-coding upstream 8962 42477721 ~ 42478112 (-)
G57998 NA non-coding upstream 70680 42539439 ~ 42540113 (-)
G58039 NA non-coding upstream 228138 42696897 ~ 42697133 (-)
G58149 NA non-coding upstream 537842 43006601 ~ 43010113 (-)
G58246 NA non-coding upstream 918424 43387183 ~ 43387918 (-)
AMCG00009582 NA other downstream 412057 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 641251 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 2310714 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 3630591 38827965 ~ 38837594 (-)
G57155 dner other downstream 3885365 38580285 ~ 38582820 (-)
G58025 NA other upstream 180091 42648850 ~ 42673707 (-)
G58333 NA other upstream 1013662 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 1520752 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 2033028 44501787 ~ 44512249 (-)
G58584 NA other upstream 2073135 44541894 ~ 44542809 (-)

Expression


Co-expression Network