G58149


Basic Information

Item Value
gene id G58149
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43006601 ~ 43010113 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72703
TTTTTTTCATGCAAAAAGCTTTAATTCACAACAGTATTTAAGACTCTGTAAATGCACAGTATGTACAGTATCGTAGTGCTACAAAagccaaattaattttaaaaaggactGCTTGCCATGAGAAATAATACCCCCACCCACATATTTACCTGTTCACGTCTGATTTCCACTCTCTTGCCGTCCAGGGTTTAATCAAAAGCTGCTTTACCAAggacacacacatccacacctCCTCCATGCTAACCAGGGACATTTGGACAATATTCTGCCCTGAAAGAGACGTGAGGCGGGCCAGGGAAACTAACCCCACCGTCCGCCCCGCATTATAAAGCTTCCCTCGCCGATTCCTCATTCCCCCGGGTTCACACACTCGGGTGCTGATCTCTCCTGCGGCCTCCGAACACACGCCACACCGTGACATCACGCAGCGCCGTTTTAACCCGGGGAAACGGTACTGGGCAGCCGGCGTCCATCACGAGAGAAGGAAACAGGATCGCCATTGTGGAAAACCGACTTTCCTCCACACTGCCGAGTGGAGAACAAGCCCGTCTGTCTAGGAGAAAGGCTCGGTACTTTATTTGTGGATCTGGGGCCGTCGCTGTTCCCGTTTACTTTTGAATTAAAGTGCATTGCGCTCACCCTGGCAGGATTACTACAGCATCAATTAGACCAGCCTCCATTAGCAGCTGTCTGGGCACAGTGGTCAAATGTGCCGAATAATCACCTGCAGTGAAGACGGCTCACTCCCATCCGCGGAGCCATGACGTCCCAAGGGCACATGAAAACCACACACCCTCGGGCCCTTGGAACCACCAGACAAGAAGCTGTAGGAATTTCCTTCTCAACGTTGCTCCCGGAGCCCCACTGTTCTGCTGTGCTACCCAAGCTCCCCATGACTTAACTGAACCACTCAACGAACGAGTACTTTGCTTTGCTTCATAACGATCTCAACCAGTCTGAGATATcaagtataaaattatattcacCCAGGAATTCTTCCAGCGTTCCAGAGTTCCACTCCGCAGATTAATCAtttcaattaacatttcaattaagaaaccgagagctcagttggaacagaaaccagcaggtcATTGCAGCCCGGGTCGAGAGCCGACAGGAAGCACAACAgaacaacacagagagacagcacAGCAAACATGAGACGCAGACAAGGACTTACAGAtcatacttgtttttttaattcagtacacAAGAGTTCCTCTCTTCAGACACCGTATAATCATTTCGGTCTTTGTCCCCCTGGAATGGTCAGAGAAGCTGCGTTTCCTTTGGTAGGGCGGGCCGGTAACCCGCTCCGACGCGACACGACGCAGGCAGCGTGGTTAGCAGGGCAGGGAGCGGGTTTGGGAAGGCGTGGGAGCAAGGACAACAGATCTGTTAAGGAGCCTCCCTTCAGAAGCGGTTTGTATCGGGCACAGCTGGAATGTTAGCgttcagaaaaaatacatacacacaaatttACAAGCGTCTGTCGGCGGTTAGAGCGCGTTCGGGAGGGAGAATAAACCGTCGCGTGTTTATTCATTACAACGCCTCGCCCCTAATGAATTCATAGGATGTTACACTACTGGTACCGAGACATCACGACGAGAGAGCGTGTGACGAGACGAGctacacattttacacaagCTCCTCTCCCGGTACACGGCCGGAGGTTTTCGCCATGCCGTTTTGTTGCGCGACTTGGCCGTACAGTAACAGTGACAGCGCAGTTCAGGTCGGAGTGGATCCGGCTCGGCGGTTATAAGAAGCGAGACCGCGTCGCTATGCTTTTCGCTTGCTGGTTCGATCCTGCAGCCTGGATCCGAGTCTGAGCGGACAGGAGGGGTGCAGAGGAGAGTCCTCTGGGAGCACCAGGGAGACGAGGGACAGCGACAGGAAGGGTCAGCGCAAGCTCGCGGTTGGGATTCTGAGATCCACGGTAAACCTTGCTGAAGACCGGGGTTCGCTCGTACGgggcatttttgtatttttgaggAGGTGGGAAAGGAGCGATTTATTAATTACAGGGGTGTTGTGGCCCCTTGGTCGACTACAACGAAACACGCCTCTGGCTTTGGACAACGTTCAGTGCAATTTCTCCTGATCGTAATGGgaatgacataaaaaaaaaggcacagacatacaaatgataaaaaaatctgaaatagcGTGGACCATGTACTTCAAAGCACAGAATCACAGAGAATCCCCCATAGACTGGCCTGTTTAAAACACCGGACGTCTTATTTCCTTCTAAATGGGCCGACACATGCAGTCACCAGCAGATTTCCTTTTCTGTGCCTGGGGGGCACATATACACTAATATACAGTAAGTACGTGGGCTGCTGGTCTCCCTAACTGAAGCCAGCAGTCATCCAAACCAGCAAATCAGAAATATCATCACTTTCTACACCTGAGTTTGCAAAGTGGGATTCTGGGTGCAGATCAAATCATATCCGctcaaacatttgttttcctccctcCCACCCTGTCCAGTGCCTCCTGACTTCAGCGCAGGGGGCCGGCATCCGAGCACTCTGTTCCTCTGAGGATCTCCGAGAGCCTCAGTCATCAGCAATCAATCATCATCCTCGCCACCACcaatttagtgttttgttttcatgccaCGATGGATGCCAAAGCACTCTGCCGGTGGAGGCTGACAAGAGTGCAAGAGCGAGGGATTACCGTATCCTGCCGCACCGAGCCGGTTCAATTAGAGAGGGAACGAGGTGGGGGGGGCGGAGTGCGAATGCCTGAGCTTTGGCAAGAGGAGCACCGACAGGATCCTGTTACGATTATAGCTTCAGCCGTAACCATCCTCTCATCATTATTAGGAACCGATGTCGGTTTTGGTCAATTTAGAAAGTCTGGCTCTGTCCCTCtggggctggggggtgggggggctacAGTGCTGATTTCAAATGCCCACTAAGGGACAGAATGAAACTCCTCCGCTAATAGACGGGTTGAAATGCCCAGTCTTTAGAGGCGGATGATTTGGTGTGACCTGTTAGACTGTGGCTCTCGGGGACCGAGTCTGGACACCACTGTCCTGCATGCAGaccgccccccccacccggGGTTTAAACATGATCATTTAAAGCCTGTTCACCGCCAGCCGCCAACCTGAACCCCGCAGTGGACGCCTGGAGTGCAGACACAGGTCAAGTACACATATGTATAAAACatctgatttaaaacaaaactccaCAATGATATGTCGAATCAAAAACATGCCCTTCAAGAACGTTTTTGAGACGCGCCCTCTCCACACACCCCCCTACAGGCCGCGAGAGGAACTGCCCCTCTGCCCCGGGCCCCTACGGCGCAGGTGAGCATGCCCAGTCCGAGGCGCCGGGGCCGACCGCGTCCGAACCCACACAGCAAGCCGTCCAGTTAGGTTGAGTTACAGATATGGAgacttgtttctgtttttacagtaaatacattcagTAGCAGATTAGGATGGACAACGTTCCTGCCTCCCGCCCCACCTCCACCCCC
>TU72704
TAAATGCACAGTATGTACAGTATCGTAGTGCTACAAAagccaaattaattttaaaaaggactGCTTGCCATGAGAAATAATACCCCCACCCACATATTTACCTGTTCACGTCTGATTTCCACTCTCTTGCCGTCCAGGGTTTAATCAAAAGCTGCTTTACCAAggacacacacatccacacctCCTCCATGCTAACCAGGGACATTTGGACAATATTCTGCCCTGAAAGAGACGTGAGGCGGGCCAGGGAAACTAACCCCACCGTCCGCCCCGCATTATAAAGCTTCCCTCGCCGATTCCTCATTCCCCCGGGTTCACACACTCGGGTGCTGATCTCTCCTGCGGCCTCCGAACACACGCCACACCGTGACATCACGCAGCGCCGTTTTAACCCGGGGAAACGGTACTGGGCAGCCGGCGTCCATCACGAGAGAAGGAAACAGGATCGCCATTGTGGAAAACCGACTTTCCTCCACACTGCCGAGTGGAGAACAAGCCCGTCTGTCTAGGAGAAAGGCTCGGTACTTTATTTGTGGATCTGGGGCCGTCGCTGTTCCCGTTTACTTTTGAATTAAAGTGCATTGCGCTCACCCTGGCAGGATTACTACAGCATCAATTAGACCAGCCTCCATTAGCAGCTGTCTGGGCACAGTGGTCAAATGTGCCGAATAATCACCTGCAGTGAAGACGGCTCACTCCCATCCGCGGAGCCATGACGTCCCAAGGGCACATGAAAACCACACACCCTCGGGCCCTTGGAACCACCAGACAAGAAGCTGTAGGAATTTCCTTCTCAACGTTGCTCCCGGAGCCCCACTGTTCTGCTGTGCTACCCAAGCTCCCCATGACTTAACTGAACCACTCAACGAACGAGTACTTTGCTTTGCTTCATAACGATCTCAACCAGTCTGAGATATcaagtataaaattatattcacCCAGGAATTCTTCCAGCGTTCCAGAGTTCCACTCCGCAGATTAATCAtttcaattaacatttcaattaagaaaccgagagctcagttggaacagaaaccagcaggtcATTGCAGCCCGGGTCGAGAGCCGACAGGAAGCACAACAgaacaacacagagagacagcacAGCAAACATGAGACGCAGACAAGGACTTACAGAtcatacttgtttttttaattcagtacacAAGAGTTCCTCTCTTCAGACACCGTATAATCATTTCGGTCTTTGTCCCCCTGGAATGGTCAGAGAAGCTGCGTTTCCTTTGGTAGGGCGGGCCGGTAACCCGCTCCGACGCGACACGACGCAGGCAGCGTGGTTAGCAGGGCAGGGAGCGGGTTTGGGAAGGCGTGGGAGCAAGGACAACAGATCTGTTAAGGAGCCTCCCTTCAGAAGCGGTTTGTATCGGGCACAGCTGGAATGTTAGCgttcagaaaaaatacatacacacaaatttACAAGCGTCTGTCGGCGGTTAGAGCGCGTTCGGGAGGGAGAATAAACCGTCGCGTGTTTATTCATTACAACGCCTCGCCCCTAATGAATTCATAGGATGTTACACTACTGGTACCGAGACATCACGACGAGAGAGCGTGTGACGAGACGAGctacacattttacacaagCTCCTCTCCCGGTACACGGCCGGAGGTTTTCGCCATGCCGTTTTGTTGCGCGACTTGGCCGTACAGTAACAGTGACAGCGCAGTTCAGGTCGGAGTGGATCCGGCTCGGCGGTTATAAGAAGCGAGACCGCGTCGCTATGCTTTTCGCTTGCTGGTTCGATCCTGCAGCCTGGATCCGAGTCTGAGCGGACAGGAGGGGTGCAGAGGAGAGTCCTCTGGGAGCACCAGGGAGACGAGGGACAGCGACAGGAAGGGTCAGCGCAAGCTCGCGGTTGGGATTCTGAGATCCACGGTAAACCTTGCTGAAGACCGGGGTTCGCTCGTACGgggcatttttgtatttttgaggAGGTGGGAAAGGAGCGATTTATTAATTACAGGGGTGTTGTGGCCCCTTGGTCGACTACAACGAAACACGCCTCTGGCTTTGGACAACGTTCAGTGCAATTTCTCCTGATCGTAATGGgaatgacataaaaaaaaaggcacagacatacaaatgataaaaaaatctgaaatagcGTGGACCATGTACTTCAAAGCACAGAATCACAGAGAATCCCCCATAGACTGGCCTGTTTAAAACACCGGACGTCTTATTTCCTTCTAAATGGGCCGACACATGCAGTCACCAGCAGATTTCCTTTTCTGTGCCTGGGGGGCACATATACACTAATATACAGTAAGTACGTGGGCTGCTGGTCTCCCTAACTGAAGCCAGCAGTCATCCAAACCAGCAAATCAGAAATATCATCACTTTCTACACCTGAGTTTGCAAAGTGGGATTCTGGGTGCAGATCAAATCATATCCGctcaaacatttgttttcctccctcCCACCCTGTCCAGTGCCTCCTGACTTCAGCGCAGGGGGCCGGCATCCGAGCACTCTGTTCCTCTGAGGATCTCCGAGAGCCTCAGTCATCAGCAATCAATCATCATCCTCGCCACCACcaatttagtgttttgttttcatgccaCGATGGATGCCAAAGCACTCTGCCGGTGGAGGCTGACAAGAGTGCAAGAGCGAGGGATTACCGTATCCTGCCGCACCGAGCCGGTTCAATTAGAGAGGGAACGAGGTGGGGGGGGCGGAGTGCGAATGCCTGAGCTTTGGCAAGAGGAGCACCGACAGGATCCTGTTACGATTATAGCTTCAGCCGTAACCATCCTCTCATCATTATTAGGAACCGATGTCGGTTTTGGTCAATTTAGAAAGTCTGGCTCTGTCCCTCtggggctggggggtgggggggctacAGTGCTGATTTCAAATGCCCACTAAGGGACAGAATGAAACTCCTCCGCTAATAGACGGGTTGAAATGCCCAGTCTTTAGAGGCGGATGATTTGGTGTGACCTGTTAGACTGTGGCTCTCGGGGACCGAGTCTGGACACCACTGTCCTGCATGCAGaccgccccccccacccggGGTTTAAACATGATCATTTAAAGCCTGTTCACCGCCAGCCGCCAACCTGAACCCCGCAGTGGACGCCTGGAGTGCAGACACAGGTCAAGTACACATATGTATAAAACatctgatttaaaacaaaactccaCAATGATATGTCGAATCAAAAACATGCCCTTCAAGAACGTTTTTGAGACGCGCCCTCTCCACACACCCCCCTACAGGCCGCGAGAGGAACTGCCCCTCTGCCCCGGGCCCCTACGGCGCAGGTGAGCATGCCCAGTCCGAGGCGCCGGGGCCGACCGCGTCCGAACCCACACAGCAAGCCGTCCAGTTAGGTTGAGTTACAGATATGGAgacttgtttctgtttttacagtaaatacattcagTAGCAGATTAGGATGGACAACGTTCCTGCCTCCCGCCCCACCTCCACCCCC

Function

NR:

description
PREDICTED: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72703 True 3513 lncRNA 0.51 1 43006601 43010113
TU72704 False 3465 lncRNA 0.52 1 43006601 43010065

Neighbor

gene id symbol gene type direction distance location
AMCG00009629 NA coding downstream 63922 42933117 ~ 42942679 (-)
AMCG00009630 NA coding downstream 75387 42927576 ~ 42931214 (-)
AMCG00009623 NA coding downstream 142969 42857803 ~ 42863632 (-)
AMCG00009624 NA coding downstream 170308 42813044 ~ 42836293 (-)
AMCG00009621 NA coding downstream 195381 42799045 ~ 42811220 (-)
AMCG00009637 NA coding upstream 207635 43217748 ~ 43219999 (-)
AMCG00009638 NA coding upstream 268430 43278543 ~ 43286068 (-)
AMCG00009645 NA coding upstream 286946 43297059 ~ 43300524 (-)
AMCG00009641 dedd,LOC106572035,LOC107665071,LOC107599036,LOC107603111,LOC107755304 coding upstream 308722 43318835 ~ 43331478 (-)
AMCG00009643 NA coding upstream 322318 43332431 ~ 43338522 (-)
G58039 NA non-coding downstream 309468 42696897 ~ 42697133 (-)
G57998 NA non-coding downstream 466488 42539439 ~ 42540113 (-)
G57988 NA non-coding downstream 528489 42477721 ~ 42478112 (-)
G57982 NA non-coding downstream 537842 42468185 ~ 42468759 (-)
G57873 NA non-coding downstream 801042 42205270 ~ 42205559 (-)
G58246 NA non-coding upstream 377070 43387183 ~ 43387918 (-)
G58277 NA non-coding upstream 465720 43475833 ~ 43476088 (-)
G58336 NA non-coding upstream 521322 43531435 ~ 43568662 (-)
G58374 NA non-coding upstream 860241 43870354 ~ 43871117 (-)
G58377 NA non-coding upstream 863668 43873781 ~ 43875739 (-)
G58025 NA other downstream 332894 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 950473 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 1179667 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 2849130 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 4169007 38827965 ~ 38837594 (-)
G58333 NA other upstream 472308 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 979398 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 1491674 44501787 ~ 44512249 (-)
G58584 NA other upstream 1531781 44541894 ~ 44542809 (-)
G58589 NA other upstream 1555956 44566069 ~ 44566834 (-)

Expression


Co-expression Network