G58178


Basic Information

Item Value
gene id G58178
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43212710 ~ 43213028 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72734
gggaagcaataaaaaaggcaaacaggatgttagggtatattgtcaaaagtgtagaattgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72734 True 319 lncRNA 0.46 1 43212710 43213028

Neighbor

gene id symbol gene type direction distance location
AMCG00009633 kcnd1,LOC107584898,LOC107601760,LOC106572071 coding upstream 99760 43105479 ~ 43112950 (+)
AMCG00009632 kcnd1,LOC107601760,LOC107584898 coding upstream 160319 43051273 ~ 43052391 (+)
AMCG00009631 NA coding upstream 209388 42977129 ~ 43003322 (+)
AMCG00009626 mon1b coding upstream 240332 42960967 ~ 42972378 (+)
AMCG00009628 NA coding upstream 285653 42914780 ~ 42927057 (+)
AMCG00009639 NA coding downstream 39174 43252202 ~ 43253062 (+)
AMCG00009634 NA coding downstream 45492 43258520 ~ 43266899 (+)
AMCG00009635 fam50a coding downstream 54899 43267927 ~ 43273372 (+)
AMCG00009640 NA coding downstream 102600 43315628 ~ 43318501 (+)
AMCG00009646 NA coding downstream 203803 43416831 ~ 43424850 (+)
G58148 NA non-coding upstream 202660 43006601 ~ 43010050 (+)
G58123 NA non-coding upstream 273836 42938007 ~ 42938874 (+)
G58008 NA non-coding upstream 576257 42629539 ~ 42636453 (+)
G57987 NA non-coding upstream 734598 42477715 ~ 42478112 (+)
G57981 NA non-coding upstream 744108 42468308 ~ 42468602 (+)
G58195 NA non-coding downstream 36375 43249403 ~ 43249641 (+)
G58215 NA non-coding downstream 96832 43309860 ~ 43311062 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding downstream 105888 43318916 ~ 43324579 (+)
G58291 NA non-coding downstream 465323 43678351 ~ 43680953 (+)
G58304 NA non-coding downstream 660753 43873781 ~ 43875723 (+)
G57830 NA other upstream 1134469 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 1613586 41596229 ~ 41599124 (+)
G57604 NA other upstream 2218051 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 3107658 40086474 ~ 40105052 (+)
G57430 NA other upstream 3263510 39948006 ~ 39949200 (+)
AMCG00009647 NA other downstream 223962 43436990 ~ 43444420 (+)
G58324 NA other downstream 719924 43932952 ~ 43935762 (+)
G58522 NA other downstream 1173469 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 1348749 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 1371534 44584562 ~ 44603609 (+)

Expression


Co-expression Network