G58246


Basic Information

Item Value
gene id G58246
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43387183 ~ 43387918 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72810
ACGCCCTTCACTGAGGACAGCGCGGAGTGTCTGAACTTTCTACAACTTGTTCTGTGGGCTCTCAGGACCAGTCCTTTCGGTGATGCAGTGCAGTGGCGCAGCAGACAGGGGTTTGAGGCCCCGCCCCGCCGCAGCACGGGATCTCCAGGCCCTTACAACGTGTTTTGGCCTGCTGTGTACTAGACGTGTCTCCTCCACACGGGACTGCAGAGACGCGGAAGCGCATTGAGCCGCATCTGACACTCTGTCCTCTGAGCAGCGCCAGCAACGACAAGATCCACTGCACTGAGTCTGTATGTGGGGCTGTTATACTTGCCAACATTGAATGTATAACACATTTAgtgttatttaatgtactgcttatgtattcattcatgttatttacatatttaaaatatccagATTTAGATGTTTAACAtatgttcatttaatttaaaaagtagattttaattaaataatctttaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72810 True 467 lncRNA 0.46 3 43387183 43387918

Neighbor

gene id symbol gene type direction distance location
AMCG00009642 NA coding downstream 13912 43345226 ~ 43373271 (-)
AMCG00009644 NA coding downstream 45518 43338664 ~ 43341665 (-)
AMCG00009643 NA coding downstream 48661 43332431 ~ 43338522 (-)
AMCG00009641 dedd,LOC106572035,LOC107665071,LOC107599036,LOC107603111,LOC107755304 coding downstream 55705 43318835 ~ 43331478 (-)
AMCG00009645 NA coding downstream 86659 43297059 ~ 43300524 (-)
AMCG00009648 wdr13,LOC107584863,LOC107552201 coding upstream 35987 43423905 ~ 43431555 (-)
AMCG00009649 NA coding upstream 46494 43434412 ~ 43439221 (-)
AMCG00009651 porcn,LOC106567241 coding upstream 56655 43444573 ~ 43455887 (-)
AMCG00009650 NA coding upstream 124527 43512445 ~ 43522137 (-)
AMCG00009652 NA coding upstream 217755 43605673 ~ 43644666 (-)
G58149 NA non-coding downstream 377070 43006601 ~ 43010113 (-)
G58039 NA non-coding downstream 690050 42696897 ~ 42697133 (-)
G57998 NA non-coding downstream 847070 42539439 ~ 42540113 (-)
G57988 NA non-coding downstream 909071 42477721 ~ 42478112 (-)
G57982 NA non-coding downstream 918424 42468185 ~ 42468759 (-)
G58277 NA non-coding upstream 87915 43475833 ~ 43476088 (-)
G58336 NA non-coding upstream 143517 43531435 ~ 43568662 (-)
G58374 NA non-coding upstream 482436 43870354 ~ 43871117 (-)
G58377 NA non-coding upstream 485863 43873781 ~ 43875739 (-)
G58391 NA non-coding upstream 551003 43938921 ~ 43947522 (-)
G58025 NA other downstream 713476 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 1331055 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 1560249 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 3229712 40121463 ~ 40157471 (-)
AMCG00009472 NA other downstream 4549589 38827965 ~ 38837594 (-)
G58333 NA other upstream 94503 43482421 ~ 43945297 (-)
AMCG00009672 NA other upstream 601593 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 1113869 44501787 ~ 44512249 (-)
G58584 NA other upstream 1153976 44541894 ~ 44542809 (-)
G58589 NA other upstream 1178151 44566069 ~ 44566834 (-)

Expression


Co-expression Network