G58304


Basic Information

Item Value
gene id G58304
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43873781 ~ 43875723 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU72891
aaaaaaaaaaaaaacaaaaaaaaaaacaccattcaCAGCGACACGGGAGGCGGAATGACACCAATCACTCGAGACAGGAGGTGGGGTGGGCGAGCCACAGGACCTTTTTCtgatgtggggtggggggtgctcaAACACAGGTTTTTCTCTATATATCCGTGTGGAGCCACATCTGCAGCAGGACTCGTAGGAAAAGAGTAGCATGCCAGCAGAGTCCTAGACTACGACCTGCGCTCCCGGGGCCGGGCTGATGCACTGCCTGGGCCGGGGACGAGCTGGGGCCACACCTGACGCAGGCGCCCGTCTTCACAATCCAGAGATGCTTCCGTCTTAGGCAattaaaccccccccccctcccaacaCTGCTACCACACCCTAATGCCCTTTTGGTCTTGTTTGTCTGGTCTCAGCGCTGCAGCCCGTCTACCCATAGTTCTCTCTGCTGCTTCGCTCTACGGTTCCCTACCGTTTCTCTTGGATTCACCGGTTCAGGGAGGAGGGGAATGTGACTAATTCTGCATGCCTTCACTTTCTACCTCCTGCGAAAACCTCCCTGTCCGACTCGTCTCGGACGCTCAGGTCTTCGGGAAGTCCTCGTTCACGGCTGTGGAGGCCGACTTCCCCGCTGCCCCCGCTCTTCAGCTCTGTGCCTTCCGGGACATCCCCACCCTGCCCCGCCCCACACAGCAGCTCGCTCTGATCAGACCCACTGCAGCCCCACGCTTTCACATTCACCAAATGCTTCGTACTCTAGTTGCACTACTTGGGAATCTGCAAGAATCGATGCAGGCagttttctgaaaatcaaaCGATTGTCCTAGgggtgtttttatttccctAAAAAGCTTAATTTGTATCTTTGCTTAGATGTCGGctttcatataatttttttttccttcagcaaAGCAAAGCTGCAGTCTGATTCCCTCCCAAGATTTTATTAAAGAACCAGTTCCCACATCCTCGAACAAAttacactttaatttattaacGCAGAGCTTCACTAAAGTGTGATTGGTAACTGGGGAGTTTTAAACTGCGGAGCAAGCTCACCTGTCCGCAAGCCCCTCCCCAACCCCAACCTGATTGGAGCTGCGGTTTGGTTTGTGAATATTCCTTTCCTGTGATTGGTTGTTTTTGGTGAAGGGACAGGGGCTCGCACGATAAAgggttttttgtttattttgtattttattttttggtcagAACTCTGGCACACCTTGTAGACTTGACCTCTTATTCTTTCTACTTTGTTAAACTCCAGATAcgttacagtaaaacaaattaatactaAGACGAGAGTATTCTGTAATAGGAGCACTTAGTGTGACAGTGAATAAAGCTGTAAAAGACACGTGggcttttgtgttttcttactGCTGCGATGCATGTTGTGTCCAAACACGACTTCCCTTCATCTGTGATCGTCAGTCGGAGCACGATGCTCAACCTCCAGGTCTCAAACATTCAGACAGCCGCTCCCATTACCACCAGCCTtctaacatttttataaaatttgatttaatcccttACCTTTAGTTTCTTTAAATTGAGAGCTCAGAGTCCAAAACACTTAAGTTAGAGTAACTTGACACCATATTTAGCCTTTTACACGGTATAGATGATGCTGATCTCTTCACTGAGAGGTCACAAGCAAACACTCAAATTCCCTAGATTTCCACAATGAGAAGAGGGGGGCCAAATGTTGAAGGATTACAATTCATACATGACCATTACACCCACTGGTCACCAGTAATGTTACTTACAGCAGGCTGTGGAAGGGATGGAGAGTTGAGATTTCACTCAAAGCTGCCAGTGTTTTGTCAACGAATCATTAGAATCAAAGACCTGGTCACAAAACACCCAGGATACCTTCTGGTGGCCAGAAATATGTATAActttaatctaaataaaaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU72891 True 1920 lncRNA 0.47 2 43873781 43875723

Neighbor

gene id symbol gene type direction distance location
AMCG00009659 uba1 coding upstream 77 43859081 ~ 43873704 (+)
AMCG00009658 camkvl,LOC101077320,LOC105006803 coding upstream 21252 43834883 ~ 43852529 (+)
AMCG00009655 tbc1d25,LOC104943506 coding upstream 117422 43751483 ~ 43756359 (+)
AMCG00009653 NA coding upstream 125653 43743454 ~ 43748128 (+)
AMCG00009654 NA coding upstream 132918 43736597 ~ 43740863 (+)
AMCG00009662 NA coding downstream 4306 43880029 ~ 43890471 (+)
AMCG00009660 NA coding downstream 22143 43897866 ~ 43902765 (+)
AMCG00009661 NA coding downstream 64570 43940293 ~ 43951629 (+)
AMCG00009670 NA coding downstream 102869 43978592 ~ 43992050 (+)
AMCG00009668 NA coding downstream 131191 44006914 ~ 44013300 (+)
G58291 NA non-coding upstream 192828 43678351 ~ 43680953 (+)
G58214 dedd,LOC108411641,LOC107758014,LOC107699191,LOC107603111 non-coding upstream 549202 43318916 ~ 43324579 (+)
G58215 NA non-coding upstream 562719 43309860 ~ 43311062 (+)
G58195 NA non-coding upstream 624140 43249403 ~ 43249641 (+)
G58178 NA non-coding upstream 660753 43212710 ~ 43213028 (+)
G58317 NA non-coding downstream 33865 43909588 ~ 43915760 (+)
G58319 NA non-coding downstream 45751 43921474 ~ 43926631 (+)
G58467 NA non-coding downstream 293762 44169485 ~ 44169789 (+)
G58510 NA non-coding downstream 449428 44325151 ~ 44325573 (+)
G58513 NA non-coding downstream 452548 44328271 ~ 44360062 (+)
AMCG00009647 NA other upstream 429361 43436990 ~ 43444420 (+)
G57830 NA other upstream 1795540 42036018 ~ 42078241 (+)
AMCG00009563 camk2n1a,camk2n2,LOC107659987,LOC108443638,LOC107557885,LOC103024774 other upstream 2274657 41596229 ~ 41599124 (+)
G57604 NA other upstream 2879122 40990802 ~ 40994659 (+)
AMCG00009516 NA other upstream 3768729 40086474 ~ 40105052 (+)
G58324 NA other downstream 57229 43932952 ~ 43935762 (+)
G58522 NA other downstream 510774 44386497 ~ 44407568 (+)
AMCG00009694 LOC103385381 other downstream 686054 44561777 ~ 44570531 (+)
AMCG00009700 plxna3,LOC102792317,LOC102288896,LOC101485239,LOC106572068,LOC106566493 other downstream 708839 44584562 ~ 44603609 (+)
G58600 plxna3,LOC107734520,LOC107584894,LOC107674285,LOC107743094 other downstream 757027 44632750 ~ 44651967 (+)

Expression


Co-expression Network