G58394


Basic Information

Item Value
gene id G58394
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 43972264 ~ 43972630 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73001
CCTCCACACACCCACAGCATGTGAAACTGTCCGGGAGCGGAGGTGAAAGCATTGTCTTGTAGTGTAGTGGATGtaaaattatgaattataaaaaaatacggtaatattatattttacatctgGCAAGGGTGTCTCCATTAGACTGTCATTATATTCATGATATTTTTTTCCAGGGAGTCATTGTTCAGAGTCGCTTCCAGAGGCTTTACACTCCAGAACTTCAACTTCACAATCGGAGAAGGACAGAGGCAGCTGTAagtgcatgtatttgtttgtgtttgaggaTCTTAACGATGGAGGACTTAGCATGccacaattaaaaagaaatacacagaaaataataaataaataaataaatgtccatgta

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU73001 True 367 lncRNA 0.37 1 43972264 43972630

Neighbor

gene id symbol gene type direction distance location
AMCG00009664 NA coding downstream 36506 43933227 ~ 43935758 (-)
AMCG00009666 LOC105890655,LOC108438067,LOC106566835,LOC106572042,LOC105026930,LOC107558917 coding downstream 41546 43924421 ~ 43930718 (-)
AMCG00009663 NA coding downstream 53494 43902295 ~ 43918770 (-)
AMCG00009665 NA coding downstream 76606 43892450 ~ 43895658 (-)
AMCG00009657 NA coding downstream 240733 43727206 ~ 43731531 (-)
AMCG00009671 NA coding upstream 24082 43996712 ~ 44006803 (-)
AMCG00009677 NA coding upstream 78780 44051410 ~ 44064467 (-)
AMCG00009678 NA coding upstream 101220 44073850 ~ 44074116 (-)
AMCG00009683 NA coding upstream 283785 44256415 ~ 44264122 (-)
AMCG00009690 gdi1,LOC105013583,LOC106567106,LOC106572620 coding upstream 312248 44284878 ~ 44293118 (-)
G58391 NA non-coding downstream 24742 43938921 ~ 43947522 (-)
G58377 NA non-coding downstream 96525 43873781 ~ 43875739 (-)
G58374 NA non-coding downstream 101147 43870354 ~ 43871117 (-)
G58336 NA non-coding downstream 403602 43531435 ~ 43568662 (-)
G58277 NA non-coding downstream 496176 43475833 ~ 43476088 (-)
G58395 NA non-coding upstream 4655 43977285 ~ 43977486 (-)
G58452 NA non-coding upstream 124646 44097276 ~ 44104710 (-)
G58456 NA non-coding upstream 136706 44109336 ~ 44109715 (-)
G58457 NA non-coding upstream 137339 44109969 ~ 44110283 (-)
G58459 NA non-coding upstream 143020 44115650 ~ 44121067 (-)
G58333 NA other downstream 26967 43482421 ~ 43945297 (-)
G58025 NA other downstream 1298557 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 1916136 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2145330 41814559 ~ 41826934 (-)
AMCG00009521 gigyf2,LOC107728389 other downstream 3814793 40121463 ~ 40157471 (-)
AMCG00009672 NA other upstream 16881 43989511 ~ 43995654 (-)
AMCG00009697 NA other upstream 529157 44501787 ~ 44512249 (-)
G58584 NA other upstream 569264 44541894 ~ 44542809 (-)
G58589 NA other upstream 593439 44566069 ~ 44566834 (-)
G58653 NA other upstream 810288 44782918 ~ 44785134 (-)

Expression


Co-expression Network