G58452


Basic Information

Item Value
gene id G58452
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44097276 ~ 44104710 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73065
GTCATCACGCACACCCCAGCGCGTCATTCAAGCGCGCCGTCCACACCTGGCAGCCCGTCGCTCTATTCGCGTCGTTTCTTTCGCTCTCCTGCCTTTCATCCGGACGATTGCTCACGCCGATGCATTCTTCACCGTGGATCGTCGCATCTCTCATTTCCCGGTTCTTCCCCGCTGTCCTGGCGTCTTTCTCCTGACCTCGGACCGCCGCTGTCCCCCTCCGGCTTCTACTTCCTCGGCTCCAGAGGACGGGATCATCGCTCGCCTGCCCAGCTCTGTGGCTTTCCTCCTTTTCTTACGCATCACAAGGATGATGACAAGGAATATCACCACCACCAACAGCACCGAGGTCACCCCGGACACGACTGGGAGGAGCAGAGAGGCTgcaatacacacaacacacaggctCTCTCACTGGGAGGTTTCATCTTTCAGTACAGCTTACAGGTCAACTGAATAGTAtttcatgaaaaacaacaacaaagcaccATTTCATTAAGTTTGTCGTGTTTCTGTGGGGAGGGATGGTGTTAACTATTCTACATGTCTATGTCCGAGGAGGGTGGACAAGCACAACTTTTGAGTAGATGTAAGATACCCAACCCCATAGGAGCTCTGCCAGATAAGAACAACCTCTGGAATTTCAGGCCACATAATAGCAGAGTCATATTGCATTAATATGACCTGTCCTTGTATTTAGACTATAAATGACTGATCTTGTGGACATAGTACCTCTCACTGTGATGACCAGCACATCACTTTCAGGAGAGGAGAAGTTACGAGTGGACACTCTTGTGTTGTAGCGGCAGCTGTAATTCCCCTGGTGGGAATACTCAGCAGCAGGAAAGGAGAAGGTGGCAGAGTGATTGACAGCTGGTGTTGACTGGATGGTGGTTCCATTGGGCTCAATCCTCATCAGGTGAAAGGTGCCCCCTGCGTACTGTGGCTCTGTGGAGCAGGTGATGCTGAAGCTCGTGCCCCTGGTCACTTCTGCAGCAGGGAGGCTGAGGGAGATGTTGGGCTGCTGAAGGACCACTGGAAATGAGGAGATGCTAatgaacaaacagaaatcaactGTAAAACCAAGTTGGAAAACATCATCCCATCCTGTAGAGAAAACTAGAGCAGATGGAGCTCAATTAGATGAAGGGTGTAGGACTGTAGGGGATTGTCCCCAGGTGTCCTCTGACTGAAGACTCAGCCTGGTGAGTGTAGCGTTATGATGgggtattttgataagagcattttagctcgtgagctgaagcactgagccaaagaagacctctccccccaaagttatcagatttccttaaagcgtgggactggtttacatcaaagtgacaatctgggaggatggcaccgagaataggccaaatagtttggaatcctgctgtgagatatctggggaagggggcctgtaggtaataaaaactctttgaaatggacgagagccgaaatcccgacacagagctatgaacccgggccaaccggcatttccaaaagatggcatggattgacatcagtcataaatcaagccccctccaataggacactgggggctgaaaccgaaatccaatctcacaaactcaagaaccaatcacctattgatctgacagacgtATAAAGGACAGcgcacggtctctctctctctctctctctctcacctgaaccagtaactcgctgccacagctcaacctgtagctctgttgccagaaccggaaccagaaaccaaccaagtctttgccagAAActgaagagttaaactgggagaaggagattgagccttacgaagaattcttttaaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73065 True 1803 lncRNA 0.50 2 44097276 44104710

Neighbor

gene id symbol gene type direction distance location
AMCG00009678 NA coding downstream 23160 44073850 ~ 44074116 (-)
AMCG00009677 NA coding downstream 32809 44051410 ~ 44064467 (-)
AMCG00009671 NA coding downstream 90473 43996712 ~ 44006803 (-)
AMCG00009664 NA coding downstream 161518 43933227 ~ 43935758 (-)
AMCG00009666 LOC105890655,LOC108438067,LOC106566835,LOC106572042,LOC105026930,LOC107558917 coding downstream 166558 43924421 ~ 43930718 (-)
AMCG00009683 NA coding upstream 151705 44256415 ~ 44264122 (-)
AMCG00009690 gdi1,LOC105013583,LOC106567106,LOC106572620 coding upstream 180168 44284878 ~ 44293118 (-)
AMCG00009693 NA coding upstream 219275 44323985 ~ 44328354 (-)
AMCG00009692 NA coding upstream 234353 44339063 ~ 44342291 (-)
AMCG00009691 NA coding upstream 241760 44346470 ~ 44354753 (-)
G58395 NA non-coding downstream 119790 43977285 ~ 43977486 (-)
G58394 NA non-coding downstream 124646 43972264 ~ 43972630 (-)
G58391 NA non-coding downstream 149754 43938921 ~ 43947522 (-)
G58377 NA non-coding downstream 221537 43873781 ~ 43875739 (-)
G58374 NA non-coding downstream 226159 43870354 ~ 43871117 (-)
G58456 NA non-coding upstream 4626 44109336 ~ 44109715 (-)
G58457 NA non-coding upstream 5259 44109969 ~ 44110283 (-)
G58459 NA non-coding upstream 10940 44115650 ~ 44121067 (-)
G58511 NA non-coding upstream 220447 44325157 ~ 44325573 (-)
G58548 flna,LOC107699576 non-coding upstream 376342 44481052 ~ 44526239 (-)
AMCG00009672 NA other downstream 101622 43989511 ~ 43995654 (-)
G58333 NA other downstream 151979 43482421 ~ 43945297 (-)
G58025 NA other downstream 1423569 42648850 ~ 42673707 (-)
AMCG00009582 NA other downstream 2041148 42041199 ~ 42056128 (-)
AMCG00009571 LOC107087052,LOC105890629 other downstream 2270342 41814559 ~ 41826934 (-)
AMCG00009697 NA other upstream 397077 44501787 ~ 44512249 (-)
G58584 NA other upstream 437184 44541894 ~ 44542809 (-)
G58589 NA other upstream 461359 44566069 ~ 44566834 (-)
G58653 NA other upstream 678208 44782918 ~ 44785134 (-)
AMCG00009739 NA other upstream 1064231 45168941 ~ 45230457 (-)

Expression


Co-expression Network