G58653


Basic Information

Item Value
gene id G58653
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 44782918 ~ 44785134 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73318
aaacAGGCAAGTCACACAGCGGCACAGGATGGGTACCGAACAGCCCGACAAAACAGCACCATCGCCGCGCTTTGCAGCTCCACCACCAGCCTCTACATGACAAAGTAAAAGCAAGGCAAAGCagaggaaatacaaaaatgcacagATACAGCAGCCGACTTGTCATCGCACTTCCGGCCCTTAACAACTCCTGCCTCGATCAGAAAGCGACGCAACGAAAAACAGAGAACGTTCAGCAGTCGAGCGCGAAGCCTGACGATGCCAAGACCCCCAGAGTTGTCCGTTCTACACCAGCCCCGCAAGCGGATCGATGCACACAGCCGGGGTCAAGGGTCACGCACAGGTCTGGAATGGGGGGGTGAATGTCCGGAAGGGTCCGATTCTGCAGAATGTCCCGGCGCTCTGTGGAAACGGCCCTCGCTATAAGTAAGCGGTGATTGGTCACTATGCGTGTTCCCCCTCCGCCGCCGCGCACGGGTCACGACAAACcacggacagagagagggggcatGTCACACGGGGGTTTGCGTGGACAAGGGGGCTCCATACTGGGGCCTGTAAACACTTTGGCGCTGGGACAATTAGGAGCCCAGGAGGAATAAACCCGGTATATTGAGATCAGAGACCAGACGCCCCGGGTTTGAACATTCAACTGAATGGcgccattttacaaaaaaataaatacagcacgCATTCGAACAGAACCAAAAAGACAGCCCCCTCCCCAAGGAAATCTAACAGAAGCCCCCTCTCAACATGctgctcaacacacacacacacacacacacactgcttcaATCCTCCACAGCCCCCACAGTCCCAAATTCTGTCCGCAGTCTCGCCTGTTCGTCTGTCAATGAGCTTCACACCCCCCCTGAAAGAAACCAGATCCCTCACCCACACGTCTCTACTGCGGAGAAGATCCCAGAGagcgccccccacccccctgtgGCCGCCCAGCTGCCGGACCGGCTGTGCGAGGCGACCGCAAGGAGAACAGGTGTGGTCTCCCCGCCGGAAAGTCAACCCAAGTGCAACCGTCTCTCCCGCGCTCTGATCGTTTACCCACTCGGTTCAGGCACAGGATGTGAACAGGACGGGGGCGCGAGGATCATTCGCTGATCTCTGTACAAACGGGACAACACAGACCCACTTTTACCTGCGACCGACCtcacaagcaaacacacacacacaagcactctCACTCGCaggcacacacacgcacaagcaGTCTCTCTcacaagcacacgcacacacacgcactctcttTCACAGGCACACGCACATACAAGCAGTCTCTCTCACAGgcacacgcacactctctctctctctccctctctctctctctctctcgcgctctctgTCACAAGCAAACACACGCAAGCACTCTCTCTCGCAGGCACACGCACTCACaagtacacgcacacacacgcagtctCTCTCACAAGCACACGGACTCGGTctcgcacgcacacgcacgcacgcacgcacacacacacacacacacacacggcagcGAACTGTGAACATGCAATAACAACACTGATAAATGGCCGCCGGCGCCCTCCGCAGCCCGAGGGAGAGAAGCACGACGGACACAACGTGGACACTCAGggctttcaattaaaaaaggagAAGTGCGAAAAACTGagcgtgtgtgggggggtggggggagcacggtcaaagagagagaaacagtgcTCCCGACAGCGAGACGCGGATGTCCCTGTACCGAAACGGCCCAACGGGACAGAGCGGCCGACACCGCGGGGGCTGGTTTGTCAGTCTGGAGTCGAGCCGCGCCGAACCCCAGCCCGGGGTCCCAACACCGATCGCCGTGACCGTCTTTAATTTCAAGTcgctgggaaaaaaaaatgaaaggatgtGCGGGGGCGGCATCTGAAGAATCTCCTGTGGTTTTGCCGGGGGGGTCAGATTCCTCGTTGGCCGCGATTCCTCCTGGAAGGGGGTGACCGAGGGAACAAGAGATGATTAAGCTGGGCGGGTGTTTGCGAGAACCGGGAgtgactgggggggggggggtgtctgcAGTCCGTGGGAAGCCATTACTGTAAAGCGGAGGAAGAACCGGTCACCGCCACCTTGCTGGGAGGGGCTCTCAGTCGTCCTTCTTCTCTCGGGGGCCGTCCTTCTGCGCCTGGAAGGAAACACAGATAACAAGGTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73318 True 2188 TUCP 0.58 2 44782918 44785134

Neighbor

gene id symbol gene type direction distance location
AMCG00009710 NA coding downstream 89385 44682664 ~ 44693533 (-)
AMCG00009705 NA coding downstream 125194 44656044 ~ 44657724 (-)
AMCG00009704 plxna3,LOC107743094,LOC107601745 coding downstream 128304 44653851 ~ 44654614 (-)
AMCG00009691 NA coding downstream 428165 44346470 ~ 44354753 (-)
AMCG00009692 NA coding downstream 440627 44339063 ~ 44342291 (-)
AMCG00009713 LOC107601746 coding upstream 3996 44789130 ~ 44808487 (-)
AMCG00009718 LOC106566500,LOC105009055,LOC102795717,LOC107584920,LOC107735484 coding upstream 136955 44922089 ~ 44927038 (-)
AMCG00009717 NA coding upstream 184828 44969962 ~ 44976755 (-)
AMCG00009723 NA coding upstream 245783 45030917 ~ 45032715 (-)
AMCG00009725 LOC105419832 coding upstream 257712 45042846 ~ 45046433 (-)
G58613 NA non-coding downstream 117587 44665122 ~ 44665331 (-)
G58612 NA non-coding downstream 117973 44664738 ~ 44664945 (-)
G58611 NA non-coding downstream 120585 44661881 ~ 44662333 (-)
G58605 NA non-coding downstream 123820 44658416 ~ 44659098 (-)
G58585 NA non-coding downstream 239741 44542943 ~ 44543177 (-)
G58654 NA non-coding upstream 470 44785604 ~ 44786772 (-)
G58699 NA non-coding upstream 107658 44892792 ~ 44893083 (-)
G58707 NA non-coding upstream 131497 44916631 ~ 44916889 (-)
G58724 NA non-coding upstream 212898 44998032 ~ 45000234 (-)
G58761 NA non-coding upstream 305083 45090217 ~ 45119224 (-)
G58589 NA other downstream 216084 44566069 ~ 44566834 (-)
G58584 NA other downstream 240109 44541894 ~ 44542809 (-)
AMCG00009697 NA other downstream 270669 44501787 ~ 44512249 (-)
AMCG00009672 NA other downstream 787264 43989511 ~ 43995654 (-)
G58333 NA other downstream 837621 43482421 ~ 43945297 (-)
AMCG00009739 NA other upstream 383807 45168941 ~ 45230457 (-)
AMCG00009742 NA other upstream 466503 45251637 ~ 45277597 (-)
AMCG00009748 NA other upstream 535623 45320757 ~ 45326055 (-)
AMCG00009755 NA other upstream 673609 45458743 ~ 45465377 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other upstream 852613 45637747 ~ 45642744 (-)

Expression


Co-expression Network