Gene
RNA
| Item | Value |
|---|---|
| gene id | G58699 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 44892792 ~ 44893083 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048570 | notochord morphogenesis | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU73386 | True | 292 | lncRNA | 0.58 | 1 | 44892792 | 44893083 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009713 | LOC107601746 | coding | downstream | 84305 | 44789130 ~ 44808487 (-) |
| AMCG00009710 | NA | coding | downstream | 199259 | 44682664 ~ 44693533 (-) |
| AMCG00009705 | NA | coding | downstream | 235068 | 44656044 ~ 44657724 (-) |
| AMCG00009704 | plxna3,LOC107743094,LOC107601745 | coding | downstream | 238178 | 44653851 ~ 44654614 (-) |
| AMCG00009691 | NA | coding | downstream | 538039 | 44346470 ~ 44354753 (-) |
| AMCG00009718 | LOC106566500,LOC105009055,LOC102795717,LOC107584920,LOC107735484 | coding | upstream | 29006 | 44922089 ~ 44927038 (-) |
| AMCG00009717 | NA | coding | upstream | 76879 | 44969962 ~ 44976755 (-) |
| AMCG00009723 | NA | coding | upstream | 137834 | 45030917 ~ 45032715 (-) |
| AMCG00009725 | LOC105419832 | coding | upstream | 149763 | 45042846 ~ 45046433 (-) |
| AMCG00009724 | LOC108265805,LOC108437579 | coding | upstream | 164591 | 45057674 ~ 45087487 (-) |
| G58654 | NA | non-coding | downstream | 106020 | 44785604 ~ 44786772 (-) |
| G58613 | NA | non-coding | downstream | 227461 | 44665122 ~ 44665331 (-) |
| G58612 | NA | non-coding | downstream | 227847 | 44664738 ~ 44664945 (-) |
| G58611 | NA | non-coding | downstream | 230459 | 44661881 ~ 44662333 (-) |
| G58605 | NA | non-coding | downstream | 233694 | 44658416 ~ 44659098 (-) |
| G58707 | NA | non-coding | upstream | 23548 | 44916631 ~ 44916889 (-) |
| G58724 | NA | non-coding | upstream | 104949 | 44998032 ~ 45000234 (-) |
| G58761 | NA | non-coding | upstream | 197134 | 45090217 ~ 45119224 (-) |
| G58808 | NA | non-coding | upstream | 291278 | 45184361 ~ 45250020 (-) |
| G58807 | NA | non-coding | upstream | 326546 | 45219629 ~ 45241933 (-) |
| G58653 | NA | other | downstream | 107658 | 44782918 ~ 44785134 (-) |
| G58589 | NA | other | downstream | 325958 | 44566069 ~ 44566834 (-) |
| G58584 | NA | other | downstream | 349983 | 44541894 ~ 44542809 (-) |
| AMCG00009697 | NA | other | downstream | 380543 | 44501787 ~ 44512249 (-) |
| AMCG00009672 | NA | other | downstream | 897138 | 43989511 ~ 43995654 (-) |
| AMCG00009739 | NA | other | upstream | 275858 | 45168941 ~ 45230457 (-) |
| AMCG00009742 | NA | other | upstream | 358554 | 45251637 ~ 45277597 (-) |
| AMCG00009748 | NA | other | upstream | 427674 | 45320757 ~ 45326055 (-) |
| AMCG00009755 | NA | other | upstream | 565660 | 45458743 ~ 45465377 (-) |
| AMCG00009766 | srpk3,LOC107601770,LOC107674354 | other | upstream | 744664 | 45637747 ~ 45642744 (-) |
