Gene
RNA
| Item | Value |
|---|---|
| gene id | G58904 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 45372758 ~ 45373072 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006915 | apoptotic process | biological_process |
| GO:0012501 | programmed cell death | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU73637 | True | 205 | lncRNA | 0.57 | 2 | 45372758 | 45373072 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009745 | mecp2,LOC105898998 | coding | downstream | 21578 | 45345981 ~ 45351180 (-) |
| AMCG00009744 | NA | coding | downstream | 54430 | 45315275 ~ 45318328 (-) |
| AMCG00009746 | LOC105912249 | coding | downstream | 67385 | 45287018 ~ 45305373 (-) |
| AMCG00009747 | cdk20,LOC107727427 | coding | downstream | 89738 | 45281202 ~ 45283020 (-) |
| AMCG00009741 | NA | coding | downstream | 103146 | 45267403 ~ 45269612 (-) |
| AMCG00009754 | NA | coding | upstream | 24117 | 45397189 ~ 45402415 (-) |
| AMCG00009756 | NA | coding | upstream | 84740 | 45457812 ~ 45458370 (-) |
| AMCG00009767 | NA | coding | upstream | 305169 | 45678241 ~ 45678855 (-) |
| AMCG00009771 | smc1a | coding | upstream | 310488 | 45683560 ~ 45695262 (-) |
| AMCG00009770 | hsd17b10 | coding | upstream | 328861 | 45701933 ~ 45704510 (-) |
| G58903 | NA | non-coding | downstream | 27499 | 45339500 ~ 45345259 (-) |
| G58902 | NA | non-coding | downstream | 33340 | 45337155 ~ 45339418 (-) |
| G58901 | NA | non-coding | downstream | 35874 | 45332215 ~ 45336884 (-) |
| G58808 | NA | non-coding | downstream | 122738 | 45184361 ~ 45250020 (-) |
| G58807 | NA | non-coding | downstream | 130825 | 45219629 ~ 45241933 (-) |
| G58940 | NA | non-coding | upstream | 100463 | 45473535 ~ 45554714 (-) |
| G58979 | NA | non-coding | upstream | 209434 | 45582506 ~ 45583007 (-) |
| G58978 | NA | non-coding | upstream | 211731 | 45584803 ~ 45585371 (-) |
| G58982 | NA | non-coding | upstream | 218675 | 45591747 ~ 45629373 (-) |
| G59002 | NA | non-coding | upstream | 261610 | 45634682 ~ 45635314 (-) |
| AMCG00009748 | NA | other | downstream | 46703 | 45320757 ~ 45326055 (-) |
| AMCG00009742 | NA | other | downstream | 95161 | 45251637 ~ 45277597 (-) |
| AMCG00009739 | NA | other | downstream | 142301 | 45168941 ~ 45230457 (-) |
| G58653 | NA | other | downstream | 587624 | 44782918 ~ 44785134 (-) |
| G58589 | NA | other | downstream | 805924 | 44566069 ~ 44566834 (-) |
| AMCG00009755 | NA | other | upstream | 85671 | 45458743 ~ 45465377 (-) |
| AMCG00009766 | srpk3,LOC107601770,LOC107674354 | other | upstream | 264675 | 45637747 ~ 45642744 (-) |
| AMCG00009769 | phf8,LOC107563633,LOC106567021,LOC107716077 | other | upstream | 375604 | 45748676 ~ 45757951 (-) |
