G59083


Basic Information

Item Value
gene id G59083
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45752722 ~ 45753672 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73850
CCTTGCCCTTCTTCAGGGTGTGTTTGGTGTGGATCTCCAGCAGGTCCAGCTCTCCGGCGCCCCCTGCTGCCCCCAGCGTCTCCTTGCTCTTGCGGCCCCTCTTCTTGCCTCCCGCCACCGCTGCCGCCCCCTCCTTTGGCTTGGGGCCCCTCTTCCTCCCAGGGGGTCGGCcaggcggtggggggggggtgtggtgAGGGGAGGGGACCCCCCGCGGACCCCCAAACGGACCCCCCGTCTTCCCCAGGTTCTGCTGGAAGATGTCCtgcagacacagaaagagagagagagagagagagaatcagtGTTTTAGAGAGTCAGGCAGCGTGTCATTCAGTGAGTGAGCGTCTGTCAGTGCGTCAGGGCTCACCTCCACCAGTCGTATCTCCTTGGCCAGCTCCTTGACCAGCTGCTGTGTCTTGATGGTCTCTGGGATCTCCTCCTCGTGCTCCGGCAGGGCCTGGGGTCAAATCACAGGACAGGGAGTCAAAACAGAGCAGTGACAGAACACACTGGGGGAACGCAAGGGGACAGTGTGTGAGCGAGTGCGAGTGTGCGCAGTGCGTGTTTACGGTCAGTGCAGTGTCAGTGCAACTGTTTGTAGTGTGCAGAGTTAGTACAGTGAGTGTGGTGCATTACAGCATGTTGAGCCTGTAGTATGTTTATTGCAGTTGAGTGTTGTGGCACGTGGTAGTGCGTCGTGGCATGTAGCATAGTGTTGTGGCACACTGAGACCTCCTTGCGTGTCCAGGTGCGGAAGGCGTTGTTCAGGGCCTTGGCTCCATGCACCAGATACGCAGCCGGGTGGCGCCGGTTCTCTCTCAGACCTGCAGGGGGCGAGAGAGAAAGTTATAGTCTGTTAGTGTGTCCGCAGTTTATTGCAGTGGGTGTTACACTGCTGATGTCACTGTTGTCAGTGTTGTTCACAGCGCTGATTTCACAGCGTAGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73850 True 951 lncRNA 0.59 1 45752722 45753672

Neighbor

gene id symbol gene type direction distance location
AMCG00009762 NA coding upstream 92236 45656761 ~ 45660486 (+)
AMCG00009765 NA coding upstream 96485 45650084 ~ 45656237 (+)
AMCG00009764 LOC103384391,LOC107373447 coding upstream 105181 45643238 ~ 45647541 (+)
AMCG00009763 plxnb3,LOC101165957,LOC102313277,LOC102780548,LOC102199036,LOC101474638 coding upstream 123344 45598607 ~ 45629378 (+)
AMCG00009757 NA coding upstream 221286 45521353 ~ 45531436 (+)
AMCG00009772 NA coding downstream 121961 45875633 ~ 45879015 (+)
AMCG00009778 NA coding downstream 151215 45904887 ~ 45913188 (+)
AMCG00009780 NA coding downstream 165759 45919431 ~ 45921344 (+)
AMCG00009784 NA coding downstream 351728 46105400 ~ 46109996 (+)
AMCG00009785 NA coding downstream 451436 46205108 ~ 46217730 (+)
G59082 NA non-coding upstream 225 45752070 ~ 45752497 (+)
G59081 NA non-coding upstream 715 45751572 ~ 45752007 (+)
G59078 NA non-coding upstream 4260 45747520 ~ 45748462 (+)
G59076 NA non-coding upstream 6468 45745941 ~ 45746254 (+)
G59047 NA non-coding upstream 49833 45701967 ~ 45702889 (+)
G59085 NA non-coding downstream 1917 45755589 ~ 45755956 (+)
G59086 NA non-coding downstream 2580 45756252 ~ 45756770 (+)
G59087 NA non-coding downstream 3438 45757110 ~ 45758269 (+)
G59091 NA non-coding downstream 6003 45759675 ~ 45763138 (+)
G59128 NA non-coding downstream 120451 45874123 ~ 45874432 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other upstream 167995 45576539 ~ 45584727 (+)
AMCG00009760 NA other upstream 176758 45573270 ~ 45575964 (+)
AMCG00009759 NA other upstream 180467 45559977 ~ 45572255 (+)
AMCG00009761 NA other upstream 241685 45507767 ~ 45511037 (+)
G58747 NA other upstream 694848 45056065 ~ 45057874 (+)
G59084 NA other downstream 914 45754586 ~ 45755115 (+)
AMCG00009782 LOC108266008,LOC103385383 other downstream 190960 45944632 ~ 45997710 (+)
AMCG00009781 NA other downstream 246370 46000042 ~ 46022184 (+)
AMCG00009786 NA other downstream 350464 46104136 ~ 46128356 (+)

Expression


Co-expression Network