G59086


Basic Information

Item Value
gene id G59086
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45756252 ~ 45756770 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73853
CACCGCGGGGGCAGGCGTGGAGAGGGGGGGCCCTACCTGCCATGGAACCAGTCCTGACAGACGTCACACTCGATCATGAAGCGCGTGACGTCATAGGGCAGCCGGCACAGACAATACACCGGCACTGACGCCATGGCGCTGGGCTGAGCTGAGGCGGGCCTCACTGGAccgggctggactggactgggctgggaggaaaggaaagagggagatgggggaggaagagagggagggaggcagggaaggagggagggagggagggcagtGAGCTGGGAGCACTGTGCTAGCTGGTCTGCAGAAAGAGTGCAGCAGTCACAACCACACTGATCACACCATGATTGGCCACctgcacagaaagagagagggagggagagagagttagaAAAGTACCTTCAGAGACAACAGGCctttaataaacatgtttaacaaATAATTAAGGTATGTTGCTAAAATTAGTCAACAAGGATCAAATGAAACATGTTCTCAGCAGGATTATTACAGTGTGTGACAGCGGGGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73853 True 519 lncRNA 0.55 1 45756252 45756770

Neighbor

gene id symbol gene type direction distance location
AMCG00009762 NA coding upstream 95766 45656761 ~ 45660486 (+)
AMCG00009765 NA coding upstream 100015 45650084 ~ 45656237 (+)
AMCG00009764 LOC103384391,LOC107373447 coding upstream 108711 45643238 ~ 45647541 (+)
AMCG00009763 plxnb3,LOC101165957,LOC102313277,LOC102780548,LOC102199036,LOC101474638 coding upstream 126874 45598607 ~ 45629378 (+)
AMCG00009757 NA coding upstream 224816 45521353 ~ 45531436 (+)
AMCG00009772 NA coding downstream 118863 45875633 ~ 45879015 (+)
AMCG00009778 NA coding downstream 148117 45904887 ~ 45913188 (+)
AMCG00009780 NA coding downstream 162661 45919431 ~ 45921344 (+)
AMCG00009784 NA coding downstream 348630 46105400 ~ 46109996 (+)
AMCG00009785 NA coding downstream 448338 46205108 ~ 46217730 (+)
G59085 NA non-coding upstream 296 45755589 ~ 45755956 (+)
G59083 NA non-coding upstream 2580 45752722 ~ 45753672 (+)
G59082 NA non-coding upstream 3755 45752070 ~ 45752497 (+)
G59081 NA non-coding upstream 4245 45751572 ~ 45752007 (+)
G59078 NA non-coding upstream 7790 45747520 ~ 45748462 (+)
G59087 NA non-coding downstream 340 45757110 ~ 45758269 (+)
G59091 NA non-coding downstream 2905 45759675 ~ 45763138 (+)
G59128 NA non-coding downstream 117353 45874123 ~ 45874432 (+)
G59142 NA non-coding downstream 271925 46028695 ~ 46028969 (+)
G59152 NA non-coding downstream 308658 46065428 ~ 46133506 (+)
G59084 NA other upstream 1137 45754586 ~ 45755115 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other upstream 171525 45576539 ~ 45584727 (+)
AMCG00009760 NA other upstream 180288 45573270 ~ 45575964 (+)
AMCG00009759 NA other upstream 183997 45559977 ~ 45572255 (+)
AMCG00009761 NA other upstream 245215 45507767 ~ 45511037 (+)
AMCG00009782 LOC108266008,LOC103385383 other downstream 187862 45944632 ~ 45997710 (+)
AMCG00009781 NA other downstream 243272 46000042 ~ 46022184 (+)
AMCG00009786 NA other downstream 347366 46104136 ~ 46128356 (+)

Expression


Co-expression Network