G59099


Basic Information

Item Value
gene id G59099
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45759711 ~ 45763140 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73869
gggagaGGCAGCTGTTCCTGTGCTTCGGGGTGAAGTGGTGAGAGGAGCAGCCTGGGGACAGAGACGGCACTTGAGTGTCTGAAACTGAGAGAGCGCGAGCGCCTCTGCTTGCTAGGACACCCTCGTTGTGCTGTCAGCTGCTAGGCTCACAACCTCATGGGAAATGTAGTCCCCCGTCCCCTCTTTTCTCCACTATACATGCACACAGGCTCCAGGCCCCAGGCGGTGCTGTAGGGGGCTCAGAAGTGTTCTGGCTGGAGCCCAACGTGGCTCGGTTAGCTGCAGTTACTGCTcagttgatttttcttttcttgtagccttaatttaaattttaattggCTTGACGaggatgttttaattgaattgattcTTCTCATTCTTAAATGGAAAAGAAATCTAACCAATGATGTTTTTACAGATTGAAACCCACTTTATAAGAACTGGGGGGGAACAAAAAAGTACTTGCAAATTGACAAACCTgaaattcaattaagcaatcCGTTTCAATTAAGGCTGCGGTTCGGCCAGGCCAGGGTGGCTCTCTGCACAGGGCCGGAGCTCCAGCCCGCCCCCGCGCCCCGCTGGCCTGTCTGTCCGGCGATAATGATGTCCATCTTGAGTTCATTTTGACAATCACAGGAGTCTGCCCCTCCCCTCCACAATTCCAATGTTAATTGGACCCAATTAAAGTTTGCCTGATTTTagacattttgaattttaatgcggtttcatttttaatgtttttcaggGTCTTCGCCACCTTCTGAGTCTCGGTGGGTTTCAGGTTCTGAGAGCAGTTTAGGTCTAATTAAGTCCAATTAAATGCTCAATCAAGCGAGTGCACGCCAGGAGAGCGTTGGCCCCTGGGGGCAGGGTGGAGAACCCCCGCCTGCTGTAGCCAAGCGGCCTCTGACACCGACTGCAGCCGCGCGTCGCAAAATCCACTTCTAACTCGATCaaatatctttcttttttaaatcactttaactgtaaatataaatttaCAAATTGTCACTTTTAACAATCCCCAACTCCCCTCGAAGGagagaatatttaaaatcttgtttcgcaccaaaaaataaatgtatatgtttaaatgtcTCTGAGCACTTGCACAGCGGAGCAGGAGGGCAGCTCAGCGGGGCAGGTGCGGACAGCAGCTGGATTAACCCTCCCATGCCAGGCTAAAAAATTAGGGACTAAAATACGAGGATTTCACTCCCTGGATCCTCCCTGCCTCCCCCGTGTCCAATCTCCCTGCACTGAGTGGCCctgctcccctccccccccagacatttaaaaacccagctgtaacAGCAAACCGCACGGTTCGGCTCGTCCTGCAGAGCACCTTATTCGTTCAGCCTGAGATGTGACCTAAatatgatcatttaaaaaagataaaagatgaTATGAATTATAATTGCTCATGCCACAGatcttatctatctatctatatatatatatatatatataacaaattaaatattaataataatcattttaaaatcctgtttctATTTCTTGCCATCTGTATTGCTGTCTGCCcacatttgtactgtattatcaTTTTGGATTATTAGattattcctttgttttttttctttaacccaCTAAAATATCGGTCTGTTTCTCTAcgtttatatttttgatgtGATTGACTGCTCACCCCCGGCAGGCTGTGCTCCGAGCTGTGGAGCTGCGGGGGTGACCTGTCTCCACCTGTGACGTCACAGACACGGTGACAGCACCGCACGTTGACACACGGTACTACAGTCGGACTGACGTGCTCACACAGACACCAGGACGGCTACAGTAGCACAGACGGACACCGTGACACTGACCAACACACGTACCGACAGGCGGATGGACACCcacgcacaacacacacacacactctgacacacagacaggcacctcTTGGTGGTGTTGAGAGAATGCTGTCGtgtctttttgtttagtttatagATCTTGTCTGGGTTGACAGACAGATGTTcctattttttctttgtagttttCAGAGACTCTGCTTCCGAGTCCTGGACCCATACCCCCCCGCTCTcctcattgtattttttttttgtttataactCTTCTAGATAATAAAGCTGATTTATATaacacaacttaaaaataaattaaagtaatactTAGACCCTAACTGACATTCTTACTATTGTTCCCGTTGTCCTAGTTGTTCAGACCCCCCTCCTCTCGGTCGTGATGATTCTTGTACTTGTAGGAGAAGAAAccataaagtaaacaaaaaaaaatacaaaatacaaaacacaacaaaaaaattaacgttttttaaaatctatatattagTAATAATTCAGAATGCTTTTGTACTGACTCCCTGCCTGCCTACCtacctgtctgtccctcccatttcctctcctctcccctccatCCTGccatctctccatccctctcttctCCTTCCCGTGCCCCCGTCCACTCCCACTGACTGACCGATCGATAGTAGGCcatattattattggtattaacTCAGTATAACGTTGTGTAGTTGTGAGTATAGGACAGAGCTTCTTAGTGAGATAACGAGACCTGAACGCAAGAAATACACAAGAAACCgacaatactgaaaataaattacgaAAAGTCAACCTTTAGTTTCATAAGATCACAATCTGAAAACGCGTCGCGTTCTTATTTAGTTTGGCATCCGCTACACTGACCTGGTTTGAGAAAAGGATCTGTTTTTGGGGTTTTAATTTTTGAATTGTAGTTTTAGCACCGCTCCCTGCTTGTAATCTACACAGTATATATGAAGACACATATagtgaaattaataaaagtaaatctgTACTCTTTGCCGTTTTTTGGTCCTGTCATTCTGGTCGCCCTCGTTTTAATGCTGTTAGTAACTCCCCCTCGACATCTAGTGGTATAAAGACGGTATTACAAGCTCGTTTTCCCTGCAAAAATCACATCCAATCGCATAACAGACAGACCCCTCCGTCAGCCGAGACACCTTCAACATTCGGTGTTAGAATTGGAAAGATTTGggattgtattttgttttgcgtttttttttttttgcgttttttttttttcttttctttttagttttggaaaatgaaaCCAGTCATTTTGTTGGAGTCTTGTGAAAAGAGACGTGATTATTGATTGTAtcttttggatttttttgttttatttcatttttattttgtatttgttttaagcGAGAAGGAGCTGCTTGTTTGGGAGGAAGGGGTTTCTATTGGTCTGTATTAGTGGAACACAAACGATTGATTGAACAAGTGAGCAGAAGATTTCAGGTGAAAAGAGGATGTTGGCTGTTTTGCTTCTACTGTTGGAAGGAAACTTACAGTgctgaaataaaatctattcTTTTAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73869 True 3386 lncRNA 0.43 2 45759711 45763140

Neighbor

gene id symbol gene type direction distance location
AMCG00009768 huwe1 coding downstream 20881 45705867 ~ 45738830 (-)
AMCG00009770 hsd17b10 coding downstream 55201 45701933 ~ 45704510 (-)
AMCG00009771 smc1a coding downstream 64449 45683560 ~ 45695262 (-)
AMCG00009767 NA coding downstream 80856 45678241 ~ 45678855 (-)
AMCG00009756 NA coding downstream 301341 45457812 ~ 45458370 (-)
AMCG00009773 fam120c coding upstream 37 45763177 ~ 45771249 (-)
AMCG00009776 NA coding upstream 11729 45774869 ~ 45781213 (-)
AMCG00009777 NA coding upstream 19103 45782243 ~ 45799948 (-)
AMCG00009775 wnk3 coding upstream 38262 45801402 ~ 45811884 (-)
AMCG00009774 NA coding upstream 102760 45865900 ~ 45869735 (-)
G59090 NA non-coding downstream 11253 45747557 ~ 45748458 (-)
G59077 NA non-coding downstream 13457 45745941 ~ 45746254 (-)
G59042 NA non-coding downstream 79591 45675703 ~ 45680120 (-)
G59022 NA non-coding downstream 94870 45664474 ~ 45664841 (-)
G59003 NA non-coding downstream 124012 45635390 ~ 45635699 (-)
G59191 NA non-coding upstream 144114 45907254 ~ 45908142 (-)
G59202 NA non-coding upstream 145441 45908581 ~ 45964055 (-)
G59236 NA non-coding upstream 298353 46061493 ~ 46112681 (-)
G59244 NA non-coding upstream 359135 46122275 ~ 46175968 (-)
AMCG00009769 phf8,LOC107563633,LOC106567021,LOC107716077 other downstream 1760 45748676 ~ 45757951 (-)
AMCG00009766 srpk3,LOC107601770,LOC107674354 other downstream 116967 45637747 ~ 45642744 (-)
AMCG00009755 NA other downstream 294334 45458743 ~ 45465377 (-)
AMCG00009748 NA other downstream 433656 45320757 ~ 45326055 (-)
AMCG00009742 NA other downstream 482114 45251637 ~ 45277597 (-)

Expression


Co-expression Network