G59142


Basic Information

Item Value
gene id G59142
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 46028695 ~ 46028969 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU73945
cggcgcttactcaagacgcatctcttccgacagcacttaatattaattaagtaatattagtaatattagtcctctatccctgctagatagcacttcacagttttattttgcttctcgtgttcttgattgttttcctccttgctccctttcccgtagccctcgtctgtaaccctacatttgacagcacttagctttcaccatccaggatgtaggaagtctcttactgtacttgtgtaaattgtaaattggaatttgtaaaatgtattttgaattgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73945 True 275 lncRNA 0.39 1 46028695 46028969

Neighbor

gene id symbol gene type direction distance location
AMCG00009780 NA coding upstream 107351 45919431 ~ 45921344 (+)
AMCG00009778 NA coding upstream 115507 45904887 ~ 45913188 (+)
AMCG00009772 NA coding upstream 149680 45875633 ~ 45879015 (+)
AMCG00009762 NA coding upstream 368209 45656761 ~ 45660486 (+)
AMCG00009765 NA coding upstream 372458 45650084 ~ 45656237 (+)
AMCG00009784 NA coding downstream 76431 46105400 ~ 46109996 (+)
AMCG00009785 NA coding downstream 176139 46205108 ~ 46217730 (+)
G59128 NA non-coding upstream 154263 45874123 ~ 45874432 (+)
G59091 NA non-coding upstream 265557 45759675 ~ 45763138 (+)
G59087 NA non-coding upstream 270426 45757110 ~ 45758269 (+)
G59086 NA non-coding upstream 271925 45756252 ~ 45756770 (+)
G59085 NA non-coding upstream 272739 45755589 ~ 45755956 (+)
G59152 NA non-coding downstream 36459 46065428 ~ 46133506 (+)
G59156 NA non-coding downstream 83251 46112220 ~ 46112856 (+)
G59169 NA non-coding downstream 140792 46169761 ~ 46187549 (+)
G59180 g6pd non-coding downstream 161677 46190646 ~ 46195343 (+)
G59179 NA non-coding downstream 190112 46219081 ~ 46220515 (+)
AMCG00009781 NA other upstream 6511 46000042 ~ 46022184 (+)
AMCG00009782 LOC108266008,LOC103385383 other upstream 30985 45944632 ~ 45997710 (+)
G59084 NA other upstream 273580 45754586 ~ 45755115 (+)
AMCG00009758 abcd1,LOC107701814,LOC107743108,LOC108440542,LOC107674359,LOC107552221,LOC107727428 other upstream 443968 45576539 ~ 45584727 (+)
AMCG00009760 NA other upstream 452731 45573270 ~ 45575964 (+)
AMCG00009786 NA other downstream 75167 46104136 ~ 46128356 (+)

Expression


Co-expression Network