AMCG00009837


Basic Information

Item Value
gene id AMCG00009837
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 1014074 ~ 1021414 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009837
TCACACTCAGCTCTATCTCTTAGCTCACAGCAGGGCACAGCCTACTCCATTACCCTGGGTACAGACATGATGGAAATGAATAGACTGCTGTGGCTGGTGGTTCTGCTCCTTAGCCTGCCTAAGTTTTACTGTGCGATGACCCAAAAGACTGCCAATGAAGGTGAAAAGCTAACAATTAAATGCAACCCGGATTCCAGCAACAAACTTTTATTAAGCACAGTTTACTGGTTCCGTCAGAACGAAATGACTGTGGAAACTCTAGTGTCTGTAGACGCCATGGGGAAGCAGAAAATGCAGTTTACCAACATTTTGAAGTTTGAAGTTGGCAAAAACTCAGATTTAACTTTTACCATCCAACATTTCACAAATCGAGACAGTGGCCTTTACTACTGTGCCACAATTATCAACAATAAGTTGCACTTCGGAGAACCGACGAGAATTTCAGCAGTACCAGTAACTACAACGACCAAGGTCAAGCCAACTGAGAAGATAACGCAAGTCACCAATGCCACTGTAAATCCATGTGCCTGTAAAACCGGCTCAGCATCCTCCAATGTGTTGAAGACCACGAAGACAAATGCAATTAACTGTGAAGTAATTGTGTGGGCGCCTCTGGTTGCCGGTTGTGGGCTGCTCTTCGTCATCCTCATCATCACCATCGTCAGCTGCAACAAAGTCAGAACGAGACGCTGCCCTCACCACTACAAGAGAAGGTACGTGATTAATTTGCAGATCATCCCTGCCGACAGTCCCCGAGCCCCGCTGATCGCCTGTTATGTTGCAGCTGGAGAGAAGAGTAACCAGCCACCAATGCTCCAGGAATAGGATTGAGTTTAACAtgattttgaaagtgaaatCCTGAGatagtaatattatatattaggGTTGTCAGCGATTAATGCGATTAATAAAAGATGAGTAAcgcattaatatttaattgaaagattCCCTTGTGATAATTTTACGTCCATTCTACTAGAATTACACTcatatatgtacatgttttatgaCATCCTAACATACgattaaatatgcaaattaatcgTGActaatttttgaaaatgtgaaattaatcgtgattaaacatttgtttggcAGCCctaatatgcatatatatgcatgctttaaaatgtcacaaatatgtgttataatgttatgtatAATAATCCCAATTGCCCATTTTGTATATTACtaaaaaatgattatatttgCCAGGAAATATAGTGCAATGTCATTATGTTGGAGGGGTGGTGCCTTATATTCTCTTTgacaaattattaataacattgtttaaaccttGTGCCTTAAactgtatacattgtttttttacaccTTGATAAAAGTTGTAcgttttgtaaaaaatatatatatattcaaatcatatatcagattaaaatattctattaaaataaattgtgaaagtTTTAGATACAtctacctgagtaaataattaagtaattgggagctcctgttg

Function

GO: NA

KEGG:

id description
ko04612 Antigen processing and presentation
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05332 Graft-versus-host disease
ko04940 Type I diabetes mellitus

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009837 True 1474 mRNA 0.38 6 1014074 1021414

Neighbor

gene id symbol gene type direction distance location
AMCG00009842 NA coding upstream 39622 962006 ~ 974452 (+)
AMCG00009841 NA coding upstream 64385 949129 ~ 949689 (+)
AMCG00009843 NA coding upstream 91389 920888 ~ 922685 (+)
AMCG00009836 NA coding upstream 111742 898278 ~ 902332 (+)
AMCG00009824 NA coding upstream 128163 883413 ~ 885911 (+)
AMCG00009840 NA coding downstream 176216 1197630 ~ 1223449 (+)
AMCG00009839 NA coding downstream 213342 1234756 ~ 1245100 (+)
AMCG00009845 NA coding downstream 288311 1309725 ~ 1313842 (+)
AMCG00009850 LOC107735852 coding downstream 408520 1429934 ~ 1485095 (+)
AMCG00009854 NA coding downstream 490005 1511419 ~ 1511967 (+)
G75644 NA non-coding upstream 268002 742885 ~ 746072 (+)
G75642 NA non-coding upstream 273044 740479 ~ 741030 (+)
G75600 NA non-coding upstream 405299 586864 ~ 608775 (+)
G75572 NA non-coding upstream 694175 304793 ~ 319899 (+)
G75556 NA non-coding upstream 907029 106073 ~ 107045 (+)
G75743 NA non-coding downstream 10052 1031466 ~ 1031717 (+)
G75767 NA non-coding downstream 149292 1170706 ~ 1174954 (+)
G75817 NA non-coding downstream 376744 1398158 ~ 1399008 (+)
G75822 NA non-coding downstream 406597 1428011 ~ 1428389 (+)
G75826 NA non-coding downstream 464072 1485486 ~ 1486092 (+)
AMCG00009838 NA other upstream 18227 984596 ~ 995847 (+)
AMCG00009821 NA other upstream 136816 867680 ~ 877258 (+)
G75745 NA other downstream 15792 1037206 ~ 1037442 (+)
AMCG00009846 NA other downstream 245445 1266859 ~ 1298242 (+)
AMCG00009844 NA other downstream 301204 1322618 ~ 1327593 (+)
G75807 NA other downstream 312553 1333967 ~ 1335050 (+)
AMCG00009851 NA other downstream 339122 1360536 ~ 1368815 (+)

Expression


Co-expression Network